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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06587.1|AE004744_2 (AE004744) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 209/209 (100%), Positives = 209/209 (100%)
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Sequence:
ATGAGCCAGTTCTTCCAGATCCATCCGGAAAATCCCCAGCCACGGCTGGTCAAGCAGGCGGTGGAAATCGTC
CGCCAGGGTGGGGTGATCGTCTATCCCACCGACTCGTCCTATGCCCTGGGCTGCCGCATCGGCGAAAAGACC
GCGGTGGATCGCATCCGCCGCATCCGCCAACTGGACGACAAGCACAACTTCACCCTGGTCTGCCGCGACCTT
TCCGAGCTGGGGGTCTATGCCAAGGTCGACACCGGCCTGTTCCGCCTGCTCAAGGCGCACACCCCCGGTCCC
TACACCTTCATCCTCAGCGCCACCCGCGAGGTGCCGCGCATGCTCCTGCACCCCAAGCGCCGCACCATCGGC
CTGCGCGTGCCGAACTGTCCGATCGCCCGGGCGCTGCTGGAGGAGCTAGGCGAACCGCTGATGAGCGTGAGC
CTGATCATGCCCGGCAGCGGCGAGCCACTGAACGATCCCTATGAAATGCGCCAGGTACTGGAACACCAGGTC
GACCTGATCGTGGACGGGGGCTATGGCGGCGGCGAGGCCTCCACCGTGATCAGCCTGACCGACACCGATCCC
GAAGTGATCCGCGTGGGTTGCGGCGATCCGGCGCCGTTCATGCAGCCGGCCTGA |
Translation:
MSQFFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKHNFTLVCRDL
SELGVYAKVDTGLFRLLKAHTPGPYTFILSATREVPRMLLHPKRRTIGLRVPNCPIARALLEELGEPLMSVS
LIMPGSGEPLNDPYEMRQVLEHQVDLIVDGGYGGGEASTVISLTDTDPEVIRVGCGDPAPFMQPA* |
AnnotationID:3684 | GeneID:3676 |
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Modification Date/Time: |
2005-04-14 07:07:55 |
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GeneProduct: | putative SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | putative translation factor |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO55331.1| (AE016862) Sua5/YciO/YrdC/YwlC family protein [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 209
Score = 344 bits (883), Expect = 2e-94
Identities = 158/205 (77%), Positives = 190/205 (92%)
>gb|AAN70073.1|AE016647_3 (AE016790) Sua5/YciO/YrdC/YwlC family protein [Pseudomonas putida
KT2440]
Length = 221
Score = 318 bits (815), Expect = 1e-86
Identities = 147/206 (71%), Positives = 180/206 (87%)
>dbj|BAC60216.1| (AP005079) putative translation factor [Vibrio parahaemolyticus]
Length = 206
Score = 276 bits (705), Expect = 8e-74
Identities = 130/205 (63%), Positives = 165/205 (80%) |
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Structural Features: | pfam01300, Sua5_yciO_yrdC, yrdC domain.
CD-Length = 178 residues, 98.9% aligned
Score = 154 bits (391), Expect = 6e-39
Identities = 71/177 (40%), Positives = 102/177 (57%), Gaps = 2/177 (1%)
COG0009, SUA5, Putative translation factor (SUA5)
[Translation, ribosomal structure and biogenesis]
CD-Length = 211 residues, 97.6% aligned
Score = 222 bits (566), Expect = 3e-59
Identities = 93/207 (44%), Positives = 119/207 (57%), Gaps = 2/207 (0%)
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