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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04041.1|AE004500_7 (AE004500) transcriptional regulator Vfr [Pseudomonas aeruginosa PAO1]
Identities = 214/214 (100%), Positives = 214/214 (100%)
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Sequence:
ATGGTAGCTATTACCCACACACCCAAACTCAAACACCTAGACAAGCTGCTCGCACACTGTCACCGCCGCCGC
TACACCGCAAAGAGCACCATCATCTATGCCGGCGATCGCTGCGAAACGCTGTTCTTCATCATCAAGGGTTCG
GTCACCATCCTCATCGAGGACGACGACGGCCGCGAAATGATCATCGGCTACCTCAACAGCGGTGATTTCTTC
GGCGAGCTGGGATTGTTCGAAAAGGAAGGCAGCGAACAGGAACGCAGCGCCTGGGTTCGTGCCAAGGTGGAA
TGCGAAGTCGCCGAGATCAGCTATGCGAAGTTCCGCGAACTGTCGCAGCAGGACTCGGAGATCCTCTACACC
CTCGGCAGCCAGATGGCCGACCGCCTGCGCAAGACCACCCGCAAGGTGGGCGACCTGGCCTTCCTCGACGTC
ACCGGACGCGTCGCCCGCACCTTGCTGGACCTGTGCCAGCAACCGGACGCCATGACCCACCCGGACGGCATG
CAGATCAAGATCACCCGCCAGGAGATCGGCCGGATCGTCGGCTGCTCGCGGGAAATGGTCGGACGCGTGCTG
AAGAGCCTGGAGGAGCAGGGCCTGGTGCATGTGAAAGGAAAGACCATGGTGGTCTTCGGCACCCGCTGA |
Translation:
MVAITHTPKLKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFF
GELGLFEKEGSEQERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDV
TGRVARTLLDLCQQPDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGTR* |
AnnotationID:3667 | GeneID:3659 |
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Modification Date/Time: |
2005-03-29 14:02:58 |
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GeneProduct: | cyclic AMP receptor-like protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | signal transduction mechanism |
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Homology: | >gb|AAN66054.1|AE016234_7 (AE016775) catabolite gene activator Crp [Pseudomonas putida
KT2440]
Length = 214
Score = 343 bits (879), Expect = 5e-94
Identities = 175/214 (81%), Positives = 184/214 (85%)
>gb|AAK14380.1|AF334764_2 (AF334764) cyclic AMP receptor protein [Vibrio parahaemolyticus]
Length = 210
Score = 277 bits (708), Expect = 4e-74
Identities = 134/202 (66%), Positives = 171/202 (84%), Gaps = 3/202 (1%)
>gb|AAM87500.1|AE014000_4 (AE014000) cyclic AMP receptor protein [Yersinia pestis KIM]
Length = 210
Score = 276 bits (705), Expect = 8e-74
Identities = 136/202 (67%), Positives = 170/202 (84%), Gaps = 3/202 (1%)
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Structural Features: | COG0664, Crp, cAMP-binding proteins - catabolite gene activator and
regulatory subunit of cAMP-dependent protein kinases
[Signal transduction mechanisms]
CD-Length = 214 residues, 93.5% aligned
Score = 138 bits (348), Expect = 5e-34
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 5/204 (2%)
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