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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06962.1|AE004778_6 (AE004778) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 212/212 (100%), Positives = 212/212 (100%)
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Sequence:
ATGCGACGCACAAAGGAAGATTCTGAAAAAACCCGTACGGCCATCCTCCTGGCCGCCGAGGAACTGTTCCTG
GAAAAAGGCGTGTCCCATACCAGCCTGGAACAGATCGCCAGGGCCGCCGGGGTGACCCGTGGCGCCGTCTAC
TGGCACTTCCAGAACAAGGCTCACCTGTTCAACGAGATGCTCAACCAGGTACGCCTGCCGCCGGAGCAACTC
ACCGAGCGCCTGTCCGGCTGCGATGGCAGCGACCCGCTGCGCTCGCTCTACGACCTCTGCCTGGAGGCCGTG
CAATCGTTGCTGACTCAGGAGAAGAAGCGCCGCATCCTGACCATCCTGATGCAACGTTGCGAATTCACCGAG
GAACTGCGCGAGGCGCAGGAACGCAACAACGCCTTCGTGCAGATGTTCATCGAACTCTGCGAGCAGTTGTTC
GCCCGCGACGAATGCCGCGTGCGGCTGCATCCGGGCATGACCCCAAGGATCGCCTCGCGCGCCTTGCACGCG
CTGATCCTGGGCCTGTTCAACGACTGGTTGCGCGACCCGCGCCTGTTCGATCCGGATACGGACGCGGAACAC
CTGCTGGAGCCGATGTTCCGTGGCCTGGTGCGCGACTGGGGTCAGGCCAGCTCGGCGCCGTAG |
Translation:
MRRTKEDSEKTRTAILLAAEELFLEKGVSHTSLEQIARAAGVTRGAVYWHFQNKAHLFNEMLNQVRLPPEQL
TERLSGCDGSDPLRSLYDLCLEAVQSLLTQEKKRRILTILMQRCEFTEELREAQERNNAFVQMFIELCEQLF
ARDECRVRLHPGMTPRIASRALHALILGLFNDWLRDPRLFDPDTDAEHLLEPMFRGLVRDWGQASSAP* |
AnnotationID:3652 | GeneID:3644 |
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Modification Date/Time: |
2005-04-20 07:07:54 |
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GeneProduct: | putative transcriptional regulator, TetR family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >emb|CAC41578.1| (AL591782) PUTATIVE TRANSCRIPTION REGULATOR PROTEIN [Sinorhizobium
meliloti]
Length = 216
Score = 130 bits (328), Expect = 4e-30
Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 1/203 (0%)
>gb|AAN29239.1|AE014341_7 (AE014341) transcriptional regulator, TetR family [Brucella suis
1330]
Length = 209
Score = 121 bits (303), Expect = 3e-27
Identities = 66/185 (35%), Positives = 108/185 (58%)
>dbj|BAB33940.1| (AP002551) acrAB operon repressor [Escherichia coli O157:H7]
Length = 215
Score = 111 bits (278), Expect = 3e-24
Identities = 64/189 (33%), Positives = 103/189 (54%)
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Structural Features: | pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.
CD-Length = 47 residues, 100.0% aligned
Score = 68.5 bits (168), Expect = 1e-12
Identities = 22/47 (46%), Positives = 32/47 (68%)
COG1309, AcrR, Transcriptional regulator [Transcription]
CD-Length = 201 residues, 98.5% aligned
Score = 65.0 bits (156), Expect = 1e-11
Identities = 48/201 (23%), Positives = 77/201 (38%), Gaps = 3/201 (1%) |
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