ViewGene
Locus Name:
GeneID:
Location:

GeneID:3612
TrivialName: PA14_04910
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_04910
PAO1 Ortholog Locus:PA0374
Sequence Length:672
Protein Length:223
Start: 433627
Stop: 434298
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG03763.1|AE004475_5 (AE004475) cell division protein FtsE [Pseudomonas aeruginosa PAO1]
Identities = 223/223 (100%), Positives = 223/223 (100%)
Sequence:
ATGATCCGCTTCGAGCAGGTCGGCAAACGCTATCCCAACGGCCACGTAGGCCTGCACGAGGTGTCCTTCCGC
GTGCACCGTGGCGAGATCCTCTTCGTCACCGGCCACTCCGGCGCCGGCAAGAGCACCCTGCTGCGCCTCATC
CTGGCGATGGAGCGACCGACCAGCGGCAAGCTGTTGCTCGGCGGCCAGGACCTGGGGCGCATCACTACCGCG
CAGATCCCTTTCCTGCGCCGGCAGATCGGCGTGGTGTTCCAGAACCACCAACTGCTCACCGATCGTACGGTG
GCGGACAACATCGCCCTGCCGCTGCAGATCCTCGGCATGCCCAAGCCGGAGATCGCCAAGCGCGTGGCCTCG
GCCCTGGAGCGGGTGAACCTGAAGGAAAAGGGCGAGGCGTTGCCTTCCGACCTTTCCACCGGCCAGCAGCAG
CGGGTCGGCATTGCCCGCGCCATCGTCCACCAGCCGGCCCTGCTGCTGGCGGACGAACCCACCGGCAACCTC
GACCCGCGACTCGCGTCGGAAATCATGGGCGTGTTCGAGGATATCAATCGCCTGGGCACCACCGTACTGATC
GCCAGCCACGACCTGGCCCTGATCGCCCGTATGCGCCATCGCATGCTGACCCTGCAGCGTGGCCGGATCATC
GCTGACCGTGAGGACGAGGCCTGA
Translation:
MIRFEQVGKRYPNGHVGLHEVSFRVHRGEILFVTGHSGAGKSTLLRLILAMERPTSGKLLLGGQDLGRITTA
QIPFLRRQIGVVFQNHQLLTDRTVADNIALPLQILGMPKPEIAKRVASALERVNLKEKGEALPSDLSTGQQQ
RVGIARAIVHQPALLLADEPTGNLDPRLASEIMGVFEDINRLGTTVLIASHDLALIARMRHRMLTLQRGRII
ADREDEA*
AnnotationID:3620GeneID:3612
AnnotatorUID: diggins
Modification Date/Time: 2005-03-25 06:06:17
Gene Name:ftsE
Confidence Code:2
GeneProduct:cell division ATP-binding protein FtsE
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(6) Cell division
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG2884
Secondary Functional Category(ies):transport of small molecules
EC Number:
Status:ACTIVE
Pathway:






 
Homology:
>gb|AAN70675.1|AE016711_3 (AE016793) cell division ABC transporter, ATP-binding protein FtsE
           [Pseudomonas putida KT2440]
          Length = 225

 Score =  376 bits (965), Expect = e-104
 Identities = 192/220 (87%), Positives = 204/220 (92%)

>gb|AAO53972.1| (AE016857) cell division ATP-binding protein FtsE [Pseudomonas
           syringae pv. tomato str. DC3000]
          Length = 223

 Score =  370 bits (951), Expect = e-102
 Identities = 189/220 (85%), Positives = 203/220 (92%)

>gb|AAK20881.1|AF334761_2 (AF334761) cell division ATP-binding protein [Aeromonas hydrophila]
          Length = 222

 Score =  253 bits (647), Expect = 5e-67
 Identities = 129/221 (58%), Positives = 166/221 (75%)






 
Structural Features:
COG2884, FtsE, Predicted ATPase involved in cell division 
[Cell division and chromosome partitioning]
CD-Length = 223 residues,  98.7% aligned
Score =  324 bits (831), Expect = 8e-90
Identities = 138/220 (62%), Positives = 171/220 (77%)








   
Genomic Context:






   
Comment:


















    ReferenceID:7227




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:24369




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:

















    ReferenceID:33719




  
Author/Investigator(s):
        





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:Misc (text/plain)







    
Data:3612_cdd.html


    		




 
URL:

















    ReferenceID:35398




  
Author/Investigator(s):
        Tyagi JS, Das TK, Kinger AK.





  
Title:
        An M. tuberculosis DNA fragment contains genes encoding cell division proteins ftsX and ftsE, a basic protein and homologues of PemK and small protein B.




  
PubMed:
        8921846


MedLine:
        




    
Source:
Gene. 1996 Oct 24;177(1-2):59-67.






    
Reference Type:Journal 







    
Data:


    		




 
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=8921846

















    ReferenceID:35399




  
Author/Investigator(s):
        Gill DR, Salmond GP.





  
Title:
        The Escherichia coli cell division proteins FtsY, FtsE and FtsX are inner membrane-associated.




  
PubMed:
        3323846


MedLine:
        




    
Source:
Mol Gen Genet. 1987 Dec;210(3):504-8.






    
Reference Type:Journal 







    
Data:


    		




 
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=3323846









           
Homologs By Global Alignment 

           

       



     
Gene ID:3612
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
5790
                           PA0374_tr
                           translation of PA0374
                           223
                           99.99
                           99.99
                           0
                           1113.0
     

     
     
161541
                           gb|AAG03763.1|AE004475_5
                           (AE004475) cell division protein FtsE [Pseudomonas aeruginosa PAO1]
                           223
                           99.99
                           99.99
                           0
                           1113.0
     

     
     
161542
                           gb|AAN70675.1|AE016711_3
                           (AE016793) cell division ABC transporter, ATP-binding protein FtsE [Pseudomonas putida KT2440]
                           225
                           85.33
                           90.66
                           2
                           960.0
     

     
     
161543
                           gb|AAO53972.1|
                           (AE016857) cell division ATP-binding protein FtsE [Pseudomonas syringae pv. tomato str. DC3000]
                           223
                           84.75
                           91.03
                           0
                           947.0
     

     
     
161544
                           gb|AAK20881.1|AF334761_2
                           (AF334761) cell division ATP-binding protein [Aeromonas hydrophila]
                           223
                           57.84
                           74.43
                           1
                           644.0
     

     






      

          
GC ORFID: 46614How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA0374Glimmer Score: 

          
Start: 6234969Stop: 6235640

          
Length: 672


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA0374 translation of PA0374Homolog Bit Score 433.0

          
Other Homologs:  psyr_15may02_Scaffold6_revised_gene6607 (ORF: BLASTX 375.0), t_PA4594 (ORF: BLASTX 147.0), psyr_15may02_Scaffold1_revised_gene899 (ORF: BLASTX 145.0), t_PA2987 (ORF: BLASTX 139.0), t_PA2857 (ORF: BLASTX 137.0), t_PA0374 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGATCCGCTTCGAGCAGGTCGGCAAACGCTATCCCAACGGCCACGTAGGCCTGCACGAGGTGTCCTTCCGC 
GTGCACCGTGGCGAGATCCTCTTCGTCACCGGCCACTCCGGCGCCGGCAAGAGCACCCTGCTGCGCCTCATC 
CTGGCGATGGAGCGACCGACCAGCGGCAAGCTGTTGCTCGGCGGCCAGGACCTGGGGCGCATCACTACCGCG 
CAGATCCCTTTCCTGCGCCGGCAGATCGGCGTGGTGTTCCAGAACCACCAACTGCTCACCGATCGTACGGTG 
GCGGACAACATCGCCCTGCCGCTGCAGATCCTCGGCATGCCCAAGCCGGAGATCGCCAAGCGCGTGGCCTCG 
GCCCTGGAGCGGGTGAACCTGAAGGAAAAGGGCGAGGCGTTGCCTTCCGACCTTTCCACCGGCCAGCAGCAG 
CGGGTCGGCATTGCCCGCGCCATCGTCCACCAGCCGGCCCTGCTGCTGGCGGACGAACCCACCGGCAACCTC 
GACCCGCGACTCGCGTCGGAAATCATGGGCGTGTTCGAGGATATCAATCGCCTGGGCACCACCGTACTGATC 
GCCAGCCACGACCTGGCCCTGATCGCCCGTATGCGCCATCGCATGCTGACCCTGCAGCGTGGCCGGATCATC 
GCTGACCGTGAGGACGAGGCCTGA