ViewGene

Locus Name:
GeneID:
Location:

GeneID:361
TrivialName: PA14_20200
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_20200
PAO1 Ortholog Locus:PA3392
Sequence Length:1911
Protein Length:636
Start: 1742264
Stop: 1740354
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06780.1|AE004760_8 (AE004760) nitrous-oxide reductase precursor [Pseudomonas aeruginosa PAO1]
Identities = 635/636 (99%), Positives = 635/636 (99%)
Sequence:
ATGAGCGACGACACGAAAAGCCCCCACGAAGAAACCCATGGCCTGAACCGCCGCGGCTTCCTCGGCGCCTCG
GCGCTGACCGGAGCCGCCGCCCTGGTTGGCGCCAGCGCCCTGGGCAGCGCGGTGGTCGGCCGCGAGGCCCGG
GCCGCGGGCAAGGGCGAGCGCAGCAAGGCCGAGGTCGCCCCCGGCGAACTGGATGAGTACTACGGGTTCTGG
AGCGGCGGACATTCCGGCGAAGTACGCGTGCTCGGCGTGCCGTCGATGCGCGAGCTGATGCGCATACCGGTG
TTCAACGTCGACTCGGCCACCGGCTGGGGCCTGACCAACGAGAGCAAGCGGGTCCTCGGCGACGGCGCGCGC
TTCCTCAACGGCGACTGCCACCATCCGCACATCTCGATGACCGACGGCAAGTACGACGGCAAGTACCTGTTC
ATCAACGACAAGGCCAACAGCCGGGTCGCGCGCATCCGCCTGGACGTCATGAAATGCGACCGCATCGTCACC
ATTCCCAACGTCCAGGCGATCCACGGCCTGCGCCTGCAAAAGGTGCCGCATACCCGCTACGTGTTCTGCAAC
GCCGAGTTCATCATCCCCCATCCCAACGACGGCTCGACCTTCGACCTGTCCGGCGACAACGCCTTCACCCTG
TACAACGCCATCGACGCCGAGACCATGGAAGTGGCCTGGCAGGTGATCGTCGACGGCAACCTCGACAACACC
GACATGGACTACAGCGGCAGGTTCGCCGCCTCCACCTGCTACAACTCGGAGAAGGCCGTCGACCTCGGCGGC
ATGATGCGTAACGAGCGCGACTGGGTGGTGGTGTTCGACATCCCGCGCATCGAGGCCGAGATCAAGGCGAAG
CGCTTCGTCACCCTCGGCGACTCGAAGGTGCCGGTGGTCGACGGCCGGCGCAAGGACGGCAAGGACAGCCCG
GTGACCCGCTACATCCCGGTACCGAAGAACCCCCACGGGCTGAACACCTCGCCGGACGGCAAGTACTTCATC
GCCAACGGCAAGCTCTCGCCGACCTGCACCATGATCGCCATCGAGCGCCTCGGCGACCTGTTCGCCGGCAAG
CTGGCCGACCCGCGCGACGTGGTGGTGGGCGAGCCGGAACTGGGCCTCGGCCCGCTGCACACCACCTTCGAT
GGCCGAGGCAACGCCTATACCACGCTGTTCATCGACAGCCAGTTGGTGAAGTGGAACCTCGCCGACGCGGTG
CGCGCCTACAAGGGCGAGAAGGTCGACTACATCCGCCAGAAGCTCGACGTGCAGTACCAGCCGGGGCACAAC
CACGCCACCCTGTGCGAGACCAGCGAAGCCGACGGCAAGTGGATCGTGGTGCTCAGCAAGTTCTCCAAGGAC
CGCTTCCTGCCCACCGGTCCGCTGCACCCGGAGAACGACCAGTTGATCGACATTTCCGGCGAGGAAATGAAG
CTGGTCCACGACGGTCCGACCTTCGCCGAACCGCACGATTGCATCCTCGCCCGCCGCGACCAGATCAAGACC
CGCAAGATCTGGGACCGCAAGGACCCGTTCTTCGCCGAGACGGTCAAGCGCGCGGAAAAGGACGGCATCGAC
CTGATGAAGGACAACAAGGTCATCCGCGAGGGCAACAAGGTCCGCGTCTACATGGTCTCGATGGCGCCCTCC
TTCGGCCTCACCGAGTTCAAGGTGAAGCAGGGCGACGAAGTCACCGTGACCATCACCAACCTCGACGAGATC
GAGGACGTGACCCACGGCTTCGTCATGGTCAACCACGGCGTCTGCATGGAGATCAGCCCGCAACAGACCTCG
TCGATCACCTTCGTCGCCGATAAGCCCGGGGTGCACTGGTACTACTGCAGCTGGTTCTGCCACGCCCTGCAC
ATGGAAATGTGCGGGCGGATGCTGGTGGAAAAGGCTTGA
Translation:
MSDDTKSPHEETHGLNRRGFLGASALTGAAALVGASALGSAVVGREARAAGKGERSKAEVAPGELDEYYGFW
SGGHSGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESKRVLGDGARFLNGDCHHPHISMTDGKYDGKYLF
INDKANSRVARIRLDVMKCDRIVTIPNVQAIHGLRLQKVPHTRYVFCNAEFIIPHPNDGSTFDLSGDNAFTL
YNAIDAETMEVAWQVIVDGNLDNTDMDYSGRFAASTCYNSEKAVDLGGMMRNERDWVVVFDIPRIEAEIKAK
RFVTLGDSKVPVVDGRRKDGKDSPVTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTCTMIAIERLGDLFAGK
LADPRDVVVGEPELGLGPLHTTFDGRGNAYTTLFIDSQLVKWNLADAVRAYKGEKVDYIRQKLDVQYQPGHN
HATLCETSEADGKWIVVLSKFSKDRFLPTGPLHPENDQLIDISGEEMKLVHDGPTFAEPHDCILARRDQIKT
RKIWDRKDPFFAETVKRAEKDGIDLMKDNKVIREGNKVRVYMVSMAPSFGLTEFKVKQGDEVTVTITNLDEI
EDVTHGFVMVNHGVCMEISPQQTSSITFVADKPGVHWYYCSWFCHALHMEMCGRMLVEKA*
AnnotationID:370GeneID:361
AnnotatorUID: diggins
Modification Date/Time: 2005-04-18 08:08:08
Gene Name:nosZ
Confidence Code:1
GeneProduct:nitrous-oxide reductase precursor
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(12) Energy metabolism
Alternate Gene Product Name:nitrous oxide reductase catalytic subunit
Functional Category Confidence Code:5
COGs:COG4263
Secondary Functional Category(ies):
EC Number:1.7.99.6
Status:ACTIVE
Pathway:
Homology:
>gb|AAA25907.1| (M22628) nitrous-oxide reductase [Pseudomonas stutzeri]
          Length = 638

 Score = 1086 bits (2809), Expect = 0.0
 Identities = 520/640 (81%), Positives = 581/640 (90%), Gaps = 6/640 (0%)

>gb|AAG34386.1|AF197468_2 (AF197468) nitrous oxide reductase catalytic subunit; NosZ
           [Pseudomonas fluorescens]
          Length = 639

 Score = 1060 bits (2742), Expect = 0.0
 Identities = 508/635 (80%), Positives = 564/635 (88%), Gaps = 2/635 (0%)

>gb|AAC38343.1| (AF016059) nitrous oxide reductase [Pseudomonas denitrificans]
          Length = 522

 Score =  964 bits (2492), Expect = 0.0
 Identities = 464/527 (88%), Positives = 489/527 (92%), Gaps = 9/527 (1%)
Structural Features:
COG4263, NosZ, Nitrous oxide reductase 
[Energy production and conversion]
CD-Length = 637 residues, 100.0% aligned
Score = 1020 bits (2638), Expect = 0.0
Identities = 452/641 (70%), Positives = 506/641 (78%), Gaps = 16/641 (2%)
Genomic Context:
Comment:
ReferenceID:725
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:17867
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:32171
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:361_cdd.html
URL:
ReferenceID:34045
Author/Investigator(s): Arai H, Mizutani M, Igarashi Y.
Title: Transcriptional regulation of the nos genes for nitrous oxide reductase in Pseudomonas aeruginosa.
PubMed: 12576577
MedLine:
Source:
Microbiology. 2003 Jan;149(Pt 1):29-36.
Reference Type:Journal
Data:
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=12576577
ReferenceID:34046
Author/Investigator(s): Vollack KU, Xie J, Hartig E, Romling U, Zumft WG.
Title: Localization of denitrification genes on the chromosomal map of Pseudomonas aeruginosa.
PubMed: 9493381
MedLine:
Source:
Microbiology. 1998 Feb;144 ( Pt 2):441-8.
Reference Type:Journal
Data:
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9493381
ReferenceID:34047
Author/Investigator(s): Zumft WG, Dreusch A, Lochelt S, Cuypers H, Friedrich B, Schneider B.
Title: Derived amino acid sequences of the nosZ gene (respiratory N2O reductase) from Alcaligenes eutrophus, Pseudomonas aeruginosa and Pseudomonas stutzeri reveal potential copper-binding residues. Implications for the CuA site of N2O reductase and cytochrome-c
PubMed: 1324835
MedLine:
Source:
Eur J Biochem. 1992 Aug 15;208(1):31-40.
Reference Type:Journal
Data:
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=1324835
ReferenceID:34048
Author/Investigator(s): Philippot L, Mirleau P, Mazurier S, Siblot S, Hartmann A, Lemanceau P, Germon JC.
Title: Characterization and transcriptional analysis of Pseudomonas fluorescens denitrifying clusters containing the nar, nir, nor and nos genes.
PubMed: 11342223
MedLine:
Source:
Biochim Biophys Acta. 2001 Feb 16;1517(3):436-40.
Reference Type:Journal
Data:
URL:http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=11342223
Homologs By Global Alignment
Gene ID:361

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
605 PA3392_tr translation of PA3392 636 99.84 99.84 0 3379.0
28498 gb|AAG06780.1|AE004760_8 (AE004760) nitrous-oxide reductase precursor [Pseudomonas aeruginosa PAO1] 636 99.84 99.84 0 3379.0
28499 emb|CAA46381.1| (X65277) nitrous-oxide reductase [Pseudomonas aeruginosa] 637 83.20 90.58 4 2847.0
28500 gb|AAA25907.1| (M22628) nitrous-oxide reductase [Pseudomonas stutzeri] 640 81.25 90.78 6 2818.0
28501 gb|AAG34386.1|AF197468_2 (AF197468) nitrous oxide reductase catalytic subunit; NosZ [Pseudomonas fluorescens] 640 79.37 88.12 5 2745.0
GC ORFID: 43363How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3392Glimmer Score:
Start: 3211668Stop: 3213578
Length: 1911
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3392 translation of PA3392Homolog Bit Score 1306.0
Other Homologs: t_PA3392 (ORF: GLIMMER)
GC ORF Sequence
ATGAGCGACGACACGAAAAGCCCCCACGAAGAAACCCATGGCCTGAACCGCCGCGGCTTCCTCGGCGCCTCG
GCGCTGACCGGAGCCGCCGCCCTGGTTGGCGCCAGCGCCCTGGGCAGCGCGGTGGTCGGCCGCGAGGCCCGG
GCCGCGGGCAAGGGCGAGCGCAGCAAGGCCGAGGTCGCCCCCGGCGAACTGGATGAGTACTACGGGTTCTGG
AGCGGCGGACATTCCGGCGAAGTACGCGTGCTCGGCGTGCCGTCGATGCGCGAGCTGATGCGCATACCGGTG
TTCAACGTCGACTCGGCCACCGGCTGGGGCCTGACCAACGAGAGCAAGCGGGTCCTCGGCGACGGCGCGCGC
TTCCTCAACGGCGACTGCCACCATCCGCACATCTCGATGACCGACGGCAAGTACGACGGCAAGTACCTGTTC
ATCAACGACAAGGCCAACAGCCGGGTCGCGCGCATCCGCCTGGACGTCATGAAATGCGACCGCATCGTCACC
ATTCCCAACGTCCAGGCGATCCACGGCCTGCGCCTGCAAAAGGTGCCGCATACCCGCTACGTGTTCTGCAAC
GCCGAGTTCATCATCCCCCATCCCAACGACGGCTCGACCTTCGACCTGTCCGGCGACAACGCCTTCACCCTG
TACAACGCCATCGACGCCGAGACCATGGAAGTGGCCTGGCAGGTGATCGTCGACGGCAACCTCGACAACACC
GACATGGACTACAGCGGCAGGTTCGCCGCCTCCACCTGCTACAACTCGGAGAAGGCCGTCGACCTCGGCGGC
ATGATGCGTAACGAGCGCGACTGGGTGGTGGTGTTCGACATCCCGCGCATCGAGGCCGAGATCAAGGCGAAG
CGCTTCGTCACCCTCGGCGACTCGAAGGTGCCGGTGGTCGACGGCCGGCGCAAGGACGGCAAGGACAGCCCG
GTGACCCGCTACATCCCGGTACCGAAGAACCCCCACGGGCTGAACACCTCGCCGGACGGCAAGTACTTCATC
GCCAACGGCAAGCTCTCGCCGACCTGCACCATGATCGCCATCGAGCGCCTCGGCGACCTGTTCGCCGGCAAG
CTGGCCGACCCGCGCGACGTGGTGGTGGGCGAGCCGGAACTGGGCCTCGGCCCGCTGCACACCACCTTCGAT
GGCCGAGGCAACGCCTATACCACGCTGTTCATCGACAGCCAGTTGGTGAAGTGGAACCTCGCCGACGCGGTG
CGCGCCTACAAGGGCGAGAAGGTCGACTACATCCGCCAGAAGCTCGACGTGCAGTACCAGCCGGGGCACAAC
CACGCCACCCTGTGCGAGACCAGCGAAGCCGACGGCAAGTGGATCGTGGTGCTCAGCAAGTTCTCCAAGGAC
CGCTTCCTGCCCACCGGTCCGCTGCACCCGGAGAACGACCAGTTGATCGACATTTCCGGCGAGGAAATGAAG
CTGGTCCACGACGGTCCGACCTTCGCCGAACCGCACGATTGCATCCTCGCCCGCCGCGACCAGATCAAGACC
CGCAAGATCTGGGACCGCAAGGACCCGTTCTTCGCCGAGACGGTCAAGCGCGCGGAAAAGGACGGCATCGAC
CTGATGAAGGACAACAAGGTCATCCGCGAGGGCAACAAGGTCCGCGTCTACATGGTCTCGATGGCGCCCTCC
TTCGGCCTCACCGAGTTCAAGGTGAAGCAGGGCGACGAAGTCACCGTGACCATCACCAACCTCGACGAGATC
GAGGACGTGACCCACGGCTTCGTCATGGTCAACCACGGCGTCTGCATGGAGATCAGCCCGCAACAGACCTCG
TCGATCACCTTCGTCGCCGATAAGCCCGGGGTGCACTGGTACTACTGCAGCTGGTTCTGCCACGCCCTGCAC
ATGGAAATGTGCGGGCGGATGCTGGTGGAAAAGGCTTGA