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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06508.1|AE004736_5 (AE004736) 3-isopropylmalate dehydratase small subunit [Pseudomonas aeruginosa PAO1]
Identities = 211/212 (99%), Positives = 212/212 (100%)
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Sequence:
ATGAAACCCTATACCCAGACGACCGGTCTCGTCGCTCCGCTGGATCGCGCCAACGTCGATACCGATCAGATC
ATTCCCAAGCAATTCCTCAAGTCGATCAAGCGCACCGGCTTCGGCCCCAATCTGTTCGACGAATGGCGCTAC
CTGGATGTCGGGCAGCCGGGACAGAACAACTCGAAGCGTCCGCTGAACCCGGACTTCGTCCTCAACCAGCCG
CGCTACCAGGGCGCCAGCGTACTGCTGGCGCGGGAGAACTTCGGCTGCGGCTCGTCCCGCGAGCACGCGCCC
TGGGCGCTGGACGAGTACGGTTTCCGCACGGTGATCGCACCGAGCTATGCCGACATCTTCTTCAACAACAGT
TTCAAGAACGGCTTGCTGCCGATCATCCTGCCCGAGGCCGAGGTGGACGAACTGTTCCGCCAGGTCGAGGCG
AACGAAGGCTACCAGTTGTCCATCGACCTGGCGGCGCAGACCGTTACCCGTCCTGATGGCAAGGTGCTGGGT
TTCGAGGTCGACCCGTTCCGCAAGCATTGCCTGCTCAACGGCCTCGACGACATCGGCCTGACGCTGCAGGAC
GCCGATGCGATCCGCGCCTTCGAGGACGGCTACCGCCAGCAGCAGCCCTGGCTGTTCCGCTGA |
Translation:
MKPYTQTTGLVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDVGQPGQNNSKRPLNPDFVLNQP
RYQGASVLLARENFGCGSSREHAPWALDEYGFRTVIAPSYADIFFNNSFKNGLLPIILPEAEVDELFRQVEA
NEGYQLSIDLAAQTVTRPDGKVLGFEVDPFRKHCLLNGLDDIGLTLQDADAIRAFEDGYRQQQPWLFR* |
AnnotationID:3597 | GeneID:3589 |
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Modification Date/Time: |
2005-04-13 07:07:26 |
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GeneProduct: | 3-isopropylmalate dehydratase, small subunit |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (2) Amino acid biosynthesis and metabolism |
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Alternate Gene Product Name: | isopropylmalate isomerase subunit |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN67601.1|AE016389_9 (AE016781) 3-isopropylmalate dehydratase, small subunit
[Pseudomonas putida KT2440]
Length = 214
Score = 376 bits (966), Expect = e-104
Identities = 181/212 (85%), Positives = 195/212 (91%)
>gb|AAM38300.1| (AE011992) 3-isopropylmalate dehydratase small subunit [Xanthomonas
axonopodis pv. citri str. 306]
Length = 215
Score = 366 bits (939), Expect = e-101
Identities = 173/211 (81%), Positives = 190/211 (90%)
>gb|AAC73182.1| (AE000117) isopropylmalate isomerase subunit [Escherichia coli K12]
Length = 201
Score = 247 bits (631), Expect = 3e-65
Identities = 124/197 (62%), Positives = 149/197 (75%), Gaps = 8/197 (4%) |
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Structural Features: | COG0066, LeuD, 3-isopropylmalate dehydratase small subunit
[Amino acid transport and metabolism]
CD-Length = 191 residues, 100.0% aligned
Score = 288 bits (738), Expect = 4e-79
Identities = 119/212 (56%), Positives = 144/212 (67%), Gaps = 21/212 (9%) |
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