ViewGene

Locus Name:
GeneID:
Location:

GeneID:3545
TrivialName: PA14_38210
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_38210
PAO1 Ortholog Locus:PA2034
Sequence Length:675
Protein Length:224
Start: 3410395
Stop: 3409721
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05422.1|AE004629_11 (AE004629) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 224/224 (100%), Positives = 224/224 (100%)
Sequence:
ATGGGCCGCTTCGTCGGGAAACAGGCGGACGGCTACGAGACGCGGATCGGCCGCCTGTTGCCGGGCTACGAG
TTGCTGCACCTGCTCAGTCGCGCGCAGTTGCTGGCCCGTCTGCCGGAACGGGCGCGCCTGCTCAGCGTCGGC
TGCGGCGCCGGCGGCGAACTGGCGGAGCTGGCCGGGTTGCGTCCAGGCTGGCGTTTCGTCGCGGCGGACCTG
TCGGCCGACATGCTCGCCCTGGCCCGCCAGCGCTGCGCCAGGCTCGGCCTGCTGGAGCGGATCGAGCTGCAC
TGCGGCGACGTCGCCGGGCTACCGCCTGCGCCGCCTTGCGATGCGGCGCTGGTCCTGCTGGTGCTGCATTTC
CTGCGCGGCGACCAGGCCAAGCGGCGCTTCCTCGAGGCGGTCGCCGAGCGTCTGGCGCCAGCGGCGCCGTTG
CTGCTGGCCAACCTGATGGAAGCCCGGGACGCCTTCGAACGCCCGGTGCAGGCCGAGGCCTGCCGCTTGGCC
GGGCTTTCCCCGGAGGACAGCGACGGCATGCTGCAACGCTTGCGCGAGGATTTCGATCCGTTGTCCGAGCAG
CGCCTCGGCGAACTGCTGGAAGACACCGGCTTCGTCCTGCCCAGCCGCTATTTCCAGGCCGTGGGCTACCAG
GCCTGGATCGCCTTCCGCGCCGGCTGA
Translation:
MGRFVGKQADGYETRIGRLLPGYELLHLLSRAQLLARLPERARLLSVGCGAGGELAELAGLRPGWRFVAADL
SADMLALARQRCARLGLLERIELHCGDVAGLPPAPPCDAALVLLVLHFLRGDQAKRRFLEAVAERLAPAAPL
LLANLMEARDAFERPVQAEACRLAGLSPEDSDGMLQRLREDFDPLSEQRLGELLEDTGFVLPSRYFQAVGYQ
AWIAFRAG*
AnnotationID:3553GeneID:3545
AnnotatorUID: diggins
Modification Date/Time: 2005-03-02 21:09:40
Gene Name:
Confidence Code:3
GeneProduct:putative methylase
Cell Localization:()
Synonyms:PA2034
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(8) Central intermediary metabolism
Alternate Gene Product Name:putative methyltransferase
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):chemotaxis
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:7093
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:24235
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:32671
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:3545_cdd.html
URL:
Homologs By Global Alignment
Gene ID:3545

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
5656 PA2034_tr translation of PA2034 224 99.99 99.99 0 1143.0
157573 gb|AAG05422.1|AE004629_11 (AE004629) hypothetical protein PA2034 [Pseudomonas aeruginosa PAO1] 224 99.99 99.99 0 1143.0
GC ORFID: 46547How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2034Glimmer Score:
Start: 1543515Stop: 1544189
Length: 675
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2034 translation of PA2034Homolog Bit Score 444.0
Other Homologs: t_PA2034 (ORF: GLIMMER)
GC ORF Sequence
ATGGGCCGCTTCGTCGGGAAACAGGCGGACGGCTACGAGACGCGGATCGGCCGCCTGTTGCCGGGCTACGAG
TTGCTGCACCTGCTCAGTCGCGCGCAGTTGCTGGCCCGTCTGCCGGAACGGGCGCGCCTGCTCAGCGTCGGC
TGCGGCGCCGGCGGCGAACTGGCGGAGCTGGCCGGGTTGCGTCCAGGCTGGCGTTTCGTCGCGGCGGACCTG
TCGGCCGACATGCTCGCCCTGGCCCGCCAGCGCTGCGCCAGGCTCGGCCTGCTGGAGCGGATCGAGCTGCAC
TGCGGCGACGTCGCCGGGCTACCGCCTGCGCCGCCTTGCGATGCGGCGCTGGTCCTGCTGGTGCTGCATTTC
CTGCGCGGCGACCAGGCCAAGCGGCGCTTCCTCGAGGCGGTCGCCGAGCGTCTGGCGCCAGCGGCGCCGTTG
CTGCTGGCCAACCTGATGGAAGCCCGGGACGCCTTCGAACGCCCGGTGCAGGCCGAGGCCTGCCGCTTGGCC
GGGCTTTCCCCGGAGGACAGCGACGGCATGCTGCAACGCTTGCGCGAGGATTTCGATCCGTTGTCCGAGCAG
CGCCTCGGCGAACTGCTGGAAGACACCGGCTTCGTCCTGCCCAGCCGCTATTTCCAGGCCGTGGGCTACCAG
GCCTGGATCGCCTTCCGCGCCGGCTGA