ViewGene

Locus Name:
GeneID:
Location:

GeneID:3543
TrivialName: PA14_50970
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_50970
PAO1 Ortholog Locus:PA1033
Sequence Length:642
Protein Length:213
Start: 4526947
Stop: 4527588
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04422.1|AE004536_1 (AE004536) probable glutathione S-transferase [Pseudomonas aeruginosa PAO1]
Identities = 212/213 (99%), Positives = 213/213 (100%)
Sequence:
ATGATCGACCTGTACTACTGGACCACCCCGAACGGCCACAAGATTACTCTTTTCCTGGAAGAAACCGGCCTG
CCCTACGCCATCCATCCGATCAATATCAGCCAGGGCGACCAGTTCCAGGCGGATTTCCTGAAGGTGTCGCCG
AACAACAAGATTCCCGCCATCGTCGATCGCCAACCAGCCGACGGCGGCGCTCCCCTGTCGCTGTTCGAGTCC
GGCGCCATCCTGCTCTATCTCGCGGAAAAGACCGGACGGTTCCTCGCCAAGGACCTGCGCGCGCGCCAGGAA
ACCCTGCAGTGGCTGTTCTGGCAGATGGGCGGGCTGGGGCCGATGGCCGGGCAGAACCACCATTTCAACCGC
TTCGCCCCGGAGAAGATTCCCTACGCCATCGACCGTTACGTCAAGGAAACCGCGCGCCTGTACGGCGTTCTC
GACCAGCGCCTGGCGGACCGCGCCTTCGTCGCTGGCGACGACTACAGCATCGCCGACATGGCCATCTATCCG
TGGATCGTCCCACATCAGTGGCAGGAGCAGGATCTCGCCGACTTCCCACACCTGCAGCGCTGGTTCGAGAGC
ATTCGCCAGCGTCCGGCGACGCAACGCGCCTATGCTTTGGTGGAGCGCATCAATCCGCCGCAGTAG
Translation:
MIDLYYWTTPNGHKITLFLEETGLPYAIHPINISQGDQFQADFLKVSPNNKIPAIVDRQPADGGAPLSLFES
GAILLYLAEKTGRFLAKDLRARQETLQWLFWQMGGLGPMAGQNHHFNRFAPEKIPYAIDRYVKETARLYGVL
DQRLADRAFVAGDDYSIADMAIYPWIVPHQWQEQDLADFPHLQRWFESIRQRPATQRAYALVERINPPQ*
AnnotationID:3551GeneID:3543
AnnotatorUID: danlee
Modification Date/Time: 2004-05-18 18:06:16
Gene Name:
Confidence Code:3
GeneProduct:probable glutathione S-transferase
Cell Localization:()
Synonyms:PA1033, yfcG
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG0625
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
        CD-Length = 211 residues,  95.3% aligned
        Score =  146 bits (370), Expect = 1e-36
Genomic Context:
Comment:
ReferenceID:7089
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:24231
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:3543

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
5650 PA1033_tr translation of PA1033 213 99.53 99.99 0 1141.0
157444 gb|AAG04422.1|AE004536_1 (AE004536) probable glutathione S-transferase [Pseudomonas aeruginosa PAO1] 213 99.53 99.99 0 1141.0
157447 emb|CAE41596.1| (BX640414) putative glutathione transferase [Bordetella pertussis] [Bordetella pertussis Tohama I] 234 69.65 79.91 22 896.0
157448 gb|AAQ60096.1| (AE016918) glutathione S-transferase [Chromobacterium violaceum ATCC 12472] 234 68.37 78.20 22 872.0
157449 dbj|BAB73081.1| (AP003584) ORF_ID:all1124~probable glutathione S-transferase [Nostoc sp. PCC 7120] 233 65.23 75.53 21 824.0
GC ORFID: 46545How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA1033Glimmer Score:
Start: 426961Stop: 426320
Length: 642
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: t_PA1033 translation of PA1033Homolog Bit Score 444.0
Other Homologs: t_PA1623 (ORF: BLASTX 213.0), t_PA1185 (ORF: BLASTX 176.0), t_PA1033 (ORF: GLIMMER)
GC ORF Sequence
ATGATCGACCTGTACTACTGGACCACCCCGAACGGCCACAAGATTACTCTTTTCCTGGAAGAAACCGGCCTG
CCCTACGCCATCCATCCGATCAATATCAGCCAGGGCGACCAGTTCCAGGCGGATTTCCTGAAGGTGTCGCCG
AACAACAAGATTCCCGCCATCGTCGATCGCCAACCAGCCGACGGCGGCGCTCCCCTGTCGCTGTTCGAGTCC
GGCGCCATCCTGCTCTATCTCGCGGAAAAGACCGGACGGTTCCTCGCCAAGGACCTGCGCGCGCGCCAGGAA
ACCCTGCAGTGGCTGTTCTGGCAGATGGGCGGGCTGGGGCCGATGGCCGGGCAGAACCACCATTTCAACCGC
TTCGCCCCGGAGAAGATTCCCTACGCCATCGACCGTTACGTCAAGGAAACCGCGCGCCTGTACGGCGTTCTC
GACCAGCGCCTGGCGGACCGCGCCTTCGTCGCTGGCGACGACTACAGCATCGCCGACATGGCCATCTATCCG
TGGATCGTCCCACATCAGTGGCAGGAGCAGGATCTCGCCGACTTCCCACACCTGCAGCGCTGGTTCGAGAGC
ATTCGCCAGCGTCCGGCGACGCAACGCGCCTATGCTTTGGTGGAGCGCATCAATCCGCCGCAGTAG