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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08539.1|AE004928_5 (AE004928) probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
Identities = 231/231 (100%), Positives = 231/231 (100%)
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Sequence:
ATGATTCTCGACCTGCATGGGTTCGGCGAGCAACTGCTCGCCGGTACCTGGATGACCCTCAAGCTGTCGCTG
GCGGCGGTCTGCGTGGGGCTGTTGCTCGGCCTCCTCGGCGCCATCGCGAAGACTTCGAAGTACGCGGCCCTG
CGCTTCCTCGGCGGCACCTACACCACCATCGTCCGTGGCGTGCCGGAAACGCTCTGGGTACTGATGATCTAT
TTCGGCACGGTGAGCGGCCTGAACGCCCTCGGCGACCTTTTCGGCAAGCCGGACCTGGCACTCTCGCCGTTC
GCCGCCGGCACCCTGGCCCTCGGCCTGTGCTTCGGCGCCTACGCCACCGAGGTGTTCCGCGGCGCGCTGTTG
TCCATTCCGCGCGGCCATCGCGAGGCCGGCCAGGCGCTCGGCCTGTCGCCCGGACGGATCTTCTGGCGCATC
GTCCTGCCGCAGATCTGGCGGGTCGCCCTGCCCGGCCTCGGCAACCTGTACCTGATCCTGCTGAAGGACACC
GCGCTGGTGTCGCTGATCACCCTCGACGAGATCATGCGCAAGGCGCAGGTCGCCTCCAACGCGACCAAGGAA
CCCTTCACCTTCTACATGACCGCGGCCGCCATCTACCTGAGCCTCACGGTCGTCATCATGGTCGCCCTGCAC
TTCCTCGAACGTCGCGCCGGCCGTGGTTTCGTGAGGAACGAGCTATGA |
Translation:
MILDLHGFGEQLLAGTWMTLKLSLAAVCVGLLLGLLGAIAKTSKYAALRFLGGTYTTIVRGVPETLWVLMIY
FGTVSGLNALGDLFGKPDLALSPFAAGTLALGLCFGAYATEVFRGALLSIPRGHREAGQALGLSPGRIFWRI
VLPQIWRVALPGLGNLYLILLKDTALVSLITLDEIMRKAQVASNATKEPFTFYMTAAAIYLSLTVVIMVALH
FLERRAGRGFVRNEL* |
AnnotationID:3495 | GeneID:3487 |
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Modification Date/Time: |
2005-03-15 14:02:19 |
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GeneProduct: | putative amino acid ABC transporter, permease protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | amino acid transport and metabolism |
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Homology: | >gb|AAO58784.1| (AE016875) amino acid ABC transporter, permease protein
[Pseudomonas syringae pv. tomato str. DC3000]
Length = 231
Score = 325 bits (832), Expect = 2e-88
Identities = 155/229 (67%), Positives = 198/229 (86%)
>gb|AAN65912.1|AE016219_5 (AE016775) amino acid ABC transporter, permease protein
[Pseudomonas putida KT2440]
Length = 230
Score = 318 bits (814), Expect = 2e-86
Identities = 154/230 (66%), Positives = 190/230 (82%)
>gb|AAO90032.1| (AE016961) amino acid ABC transporter, permease protein [Coxiella
burnetii RSA 493]
Length = 221
Score = 188 bits (477), Expect = 2e-47
Identities = 105/214 (49%), Positives = 144/214 (67%), Gaps = 4/214 (1%) |
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Structural Features: | COG4215, ArtQ, ABC-type arginine transport system, permease component
[Amino acid transport and metabolism]
CD-Length = 230 residues, 100.0% aligned
Score = 268 bits (688), Expect = 2e-73
Identities = 134/230 (58%), Positives = 171/230 (74%), Gaps = 3/230 (1%)
COG0765, HisM, ABC-type amino acid transport system, permease component
[Amino acid transport and metabolism]
CD-Length = 222 residues, 96.8% aligned
Score = 176 bits (447), Expect = 3e-45
Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 10/225 (4%)
COG4160, ArtM, ABC-type arginine/histidine transport system, permease component
[Amino acid transport and metabolism]
CD-Length = 228 residues, 94.7% aligned
Score = 137 bits (346), Expect = 1e-33
Identities = 72/217 (33%), Positives = 119/217 (54%), Gaps = 1/217 (0%) |
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