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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08291.1|AE004903_9 (AE004903) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 236/237 (99%), Positives = 237/237 (100%)
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Sequence:
ATGAGCAAACCGGGCCAACGCGTGCTGGCCGAGCTGCGCAAGCTGATCGCTTCCGGCGAACTCGCCGCCGGC
GAGCGCATCGTCGAGATTCCCACCGCCGAACGCCTGCAGGTCTCGCGCATGCCGGTGCGCATCGCCCTGCGT
ACCCTCGAGCAGGAAGGCCTGCTGTGCAAGACCGGGCGCGGCTACAGGGTGCGCGCGGTGACCCGCGAGGAT
ATCGCCGGCGCGGTCGAGGTGCGCGGCGTTCTGGAAGGCCTGGCGGCACGCCAGGCGGCCGAGCGCGGGCTG
TCCGCCGAGGCACGGGCGACCCTGGAGGAATGCCTGGCCGAGGGCGACCGATTGTTCGCCAACGGCCAGGTC
CTGCTGGAGGAGCTGGAGCGCTACCAGCGCATGAACATGCGCTTCCACCGCACCATCATCGAGGCCAGCGGC
AACCCGGCGATCGCCGTGGCGCTGGCGCGCAACGACCACCTGCCGTTCGCCTCGGTGAGCGCCCTGGCGGTG
GATCGCGACAATCTCGAGCAGGAATTCCGCCGTTTCAACTTCGCCCACATGCAGCACCACGCGGTGGTCGAC
GCGCTGGTCAACGGCCAGGGGGCGCGCGCCGAGGCGATCATGCGCGAGCACGCCAACGCGACCTTGCGCTAC
GCCGACTACTTCGATCCGGCGCGGAAGGGCGTCACCGTGCTTCACGGCGACGTCGCCGCCGACTAG |
Translation:
MSKPGQRVLAELRKLIASGELAAGERIVEIPTAERLQVSRMPVRIALRTLEQEGLLCKTGRGYRVRAVTRED
IAGAVEVRGVLEGLAARQAAERGLSAEARATLEECLAEGDRLFANGQVLLEELERYQRMNMRFHRTIIEASG
NPAIAVALARNDHLPFASVSALAVDRDNLEQEFRRFNFAHMQHHAVVDALVNGQGARAEAIMREHANATLRY
ADYFDPARKGVTVLHGDVAAD* |
AnnotationID:3477 | GeneID:3469 |
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Modification Date/Time: |
2005-03-11 14:02:10 |
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GeneProduct: | putative transcriptional regulator |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN69334.1|AE016570_11 (AE016788) transcriptional regulator VanR, putative [Pseudomonas
putida KT2440]
Length = 237
Score = 319 bits (818), Expect = 8e-87
Identities = 166/224 (74%), Positives = 193/224 (86%), Gaps = 1/224 (0%)
>gb|AAO56399.1| (AE016866) transcriptional regulator VanR [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 236
Score = 309 bits (792), Expect = 8e-84
Identities = 159/221 (71%), Positives = 185/221 (83%), Gaps = 1/221 (0%)
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Structural Features: | COG1802, GntR, Transcriptional regulators [Transcription]
CD-Length = 230 residues, 87.4% aligned
Score = 105 bits (262), Expect = 6e-24
Identities = 74/214 (34%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
COG2186, FadR, Transcriptional regulators [Transcription]
CD-Length = 241 residues, 90.5% aligned
Score = 77.0 bits (189), Expect = 2e-15
Identities = 69/231 (29%), Positives = 93/231 (40%), Gaps = 33/231 (14%) |
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