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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05387.1|AE004626_6 (AE004626) probable CoA transferase, subunit A [Pseudomonas aeruginosa PAO1]
Identities = 232/232 (100%), Positives = 232/232 (100%)
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Sequence:
ATGAGCGGACTCGACAAGCGAGTAGGCAGTTACGAAGAGGCCCTCGAAGGCCTGACCGACGGCATGACCGTC
CTCGCCGGGGGCTTCGGCCTCTGCGGGATTCCCGAGAACCTGATCGCGGAAATCCGCCGGCGCGGGGTCAGG
GACCTCACGGTGGTCTCGAACAACTGCGGCGTCGACGGTTTCGGCCTCGGCGTGCTGCTGGAAGACCGGCAG
ATCCGCAAGATGATCGCCTCCTACGTCGGCGAGAACGCCCTGTTCGAGCAACAACTGCTCAGTGGCGAGCTG
GAAGTCGAACTGACCCCGCAAGGCTCGCTGGCCGAGAAGATCCGCGCCGGCGGCGCCGGCATCCCGGCCTTC
TTCACCGCCACCGGCTACGGCACCCCGGTCGCCGAGGGCAAGGAGGCGCGCGAGTTCAATGGCCGCCACTAC
ATCCTCGAGCCGGCCATCACCGGCGACTTCGCCATCGTCAAGGGCTGGAAGGCCGACCATTTCGGCAACGTC
GTCTATCGCCACACCGCGCAGAACTTCAACCCGCTGGTCGCCACCGCCGGGCGCATCACGGTGGTCGAGGTG
GAGGAGATCGTCGAGCCCGGCGAACTGGACCCGACGCAAATCCACACCCCCGGCATCTACGTCGACCGGATC
ATCCAGGGTCGCTTCGAGAAACGCATCGAGAAACGCACGCTGCGCGCCTGA |
Translation:
MSGLDKRVGSYEEALEGLTDGMTVLAGGFGLCGIPENLIAEIRRRGVRDLTVVSNNCGVDGFGLGVLLEDRQ
IRKMIASYVGENALFEQQLLSGELEVELTPQGSLAEKIRAGGAGIPAFFTATGYGTPVAEGKEAREFNGRHY
ILEPAITGDFAIVKGWKADHFGNVVYRHTAQNFNPLVATAGRITVVEVEEIVEPGELDPTQIHTPGIYVDRI
IQGRFEKRIEKRTLRA* |
AnnotationID:3425 | GeneID:3417 |
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Modification Date/Time: |
2005-03-02 18:06:04 |
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GeneProduct: | putative CoA transferase, subunit A |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (13) Fatty acid and phospholipid metabolism |
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Alternate Gene Product Name: | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | central intermediary metabolism |
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Homology: | >gb|AAO56930.1| (AE016868) 3-oxoacid CoA-transferase, subunit A family [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 233
Score = 407 bits (1047), Expect = e-113
Identities = 196/231 (84%), Positives = 219/231 (94%)
>gb|AAN54944.1|AE015632_10 (AE015632) acetate CoA-transferase, subunit A [Shewanella
oneidensis MR-1]
Length = 234
Score = 351 bits (901), Expect = 2e-96
Identities = 170/232 (73%), Positives = 199/232 (85%)
>emb|CAB15925.1| (Z99123) succinyl CoA:3-oxoacid CoA-transferase (subunit A)
[Bacillus subtilis subsp. subtilis str. 168]
Length = 238
Score = 308 bits (790), Expect = 1e-83
Identities = 152/229 (66%), Positives = 185/229 (80%), Gaps = 1/229 (0%) |
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Structural Features: | COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
[Lipid metabolism]
CD-Length = 220 residues, 98.2% aligned
Score = 304 bits (779), Expect = 7e-84
Identities = 123/216 (56%), Positives = 161/216 (74%)
pfam01144, CoA_trans, Coenzyme A transferase.
CD-Length = 218 residues, 94.5% aligned
Score = 211 bits (539), Expect = 6e-56
Identities = 116/208 (55%), Positives = 142/208 (68%), Gaps = 8/208 (3%) |
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