ViewGene

Locus Name:
GeneID:
Location:

GeneID:3365
TrivialName: PA14_00700
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_00700
PAO1 Ortholog Locus:PA0058
Sequence Length:705
Protein Length:234
Start: 70324
Stop: 71028
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG03448.1|AE004445_9 (AE004445) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 232/234 (99%), Positives = 233/234 (99%)
Sequence:
ATGAACGACCTCACCCTGCATTACCTCTACGATCCGCTCTGCGGCTGGTGCTACGGCGCCTCGCCGCTGCTC
GCCGCCGCCCGCGAGGTGACGGGTCTGGACGTACGCCTGCATGGCGGCGGCATGATGACCGATGCCAACCGC
CAGCCGGTCGGCGCCGGTCTGCGCCACTACGTGATGCCCCATGACCTGCGGATCGCCCAACTGACCGGCCAG
CCGTTCGGCAAGGACTACTTCGACGGCCTGCTGCGCGACACCAGCGCGGTATTCGACTCGGCCCCGCCGACC
GCCGCCGTGCTTGCCGCCGAAGCGCTCGACGGCCTCGGCGCGGCGATGCTGGCGCGGATCCAGCGTGCCCAC
TACGTCGAGGGCCGGCGTATCGCCGAGCGTCCGGTGCTGCTCGAGCTGGGTGCCGAACTGGGGCTTGGCGAG
GGCTTCGCCGAGGCGTTCGACGCCTGCTCCGGCGAGCCGCTGCGCGCGCACTTCGCCGACAGTCGGCGGCTG
ATGAACCGTCTCGGCGCCGCTGGCTTCCCGACCTTCGCCCTGGAGCGCGACGGCCGCCTGCAGGTGCTCGAC
ACCGGGCGCTACCTCGGCCAGCCGGACGACTGGCGGGCTTTCCTCGAAACGCAGCTGCGCCTTGCCGGCGGC
AGCGGTGCCTTGGGCGGGGCCGCGGCGCCGCTCTGCCGCATCGACGGTTGCGCCTGA
Translation:
MNDLTLHYLYDPLCGWCYGASPLLAAAREVTGLDVRLHGGGMMTDANRQPVGAGLRHYVMPHDLRIAQLTGQ
PFGKDYFDGLLRDTSAVFDSAPPTAAVLAAEALDGLGAAMLARIQRAHYVEGRRIAERPVLLELGAELGLGE
GFAEAFDACSGEPLRAHFADSRRLMNRLGAAGFPTFALERDGRLQVLDTGRYLGQPDDWRAFLETQLRLAGG
SGALGGAAAPLCRIDGCA*
AnnotationID:3373GeneID:3365
AnnotatorUID: diggins
Modification Date/Time: 2005-03-22 16:04:18
Gene Name:
Confidence Code:3
GeneProduct:putative protein-disulfide isomerase
Cell Localization:()
Synonyms:PA0058
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(4) Biosynthesis of cofactors, prosthetic groups and carriers
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG3531
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
COG3531, COG3531, Predicted protein-disulfide isomerase 
[Posttranslational modification, protein turnover, chaperones]
CD-Length = 212 residues, 100.0% aligned
Score =  262 bits (670), Expect = 3e-71
Identities = 128/214 (59%), Positives = 148/214 (69%), Gaps = 4/214 (1%)

Structural Features:
Genomic Context:
Comment:
ReferenceID:6733
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:23875
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:33413
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:3365_cdd.html
URL:
Homologs By Global Alignment
Gene ID:3365

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
5394 PA0058_tr translation of PA0058 234 99.14 99.57 0 1218.0
150949 gb|AAG03448.1|AE004445_9 (AE004445) hypothetical protein PA0058 [Pseudomonas aeruginosa PAO1] 234 99.14 99.57 0 1218.0
150950 emb|CAD15146.1| (AL646064) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum] 247 53.03 64.37 18 637.0
150953 gb|AAQ60605.1| (AE016920) conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] 236 48.30 58.89 11 530.0
150951 gb|AAM86739.1|AE013920_3 (AE013920) hypothetical [Yersinia pestis KIM] 236 47.45 59.74 27 553.0
GC ORFID: 46367How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0058Glimmer Score:
Start: 5871661Stop: 5872365
Length: 705
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA0058 translation of PA0058Homolog Bit Score 473.0
Other Homologs: t_PA0058 (ORF: GLIMMER)
GC ORF Sequence
ATGAACGACCTCACCCTGCATTACCTCTACGATCCGCTCTGCGGCTGGTGCTACGGCGCCTCGCCGCTGCTC
GCCGCCGCCCGCGAGGTGACGGGTCTGGACGTACGCCTGCATGGCGGCGGCATGATGACCGATGCCAACCGC
CAGCCGGTCGGCGCCGGTCTGCGCCACTACGTGATGCCCCATGACCTGCGGATCGCCCAACTGACCGGCCAG
CCGTTCGGCAAGGACTACTTCGACGGCCTGCTGCGCGACACCAGCGCGGTATTCGACTCGGCCCCGCCGACC
GCCGCCGTGCTTGCCGCCGAAGCGCTCGACGGCCTCGGCGCGGCGATGCTGGCGCGGATCCAGCGTGCCCAC
TACGTCGAGGGCCGGCGTATCGCCGAGCGTCCGGTGCTGCTCGAGCTGGGTGCCGAACTGGGGCTTGGCGAG
GGCTTCGCCGAGGCGTTCGACGCCTGCTCCGGCGAGCCGCTGCGCGCGCACTTCGCCGACAGTCGGCGGCTG
ATGAACCGTCTCGGCGCCGCTGGCTTCCCGACCTTCGCCCTGGAGCGCGACGGCCGCCTGCAGGTGCTCGAC
ACCGGGCGCTACCTCGGCCAGCCGGACGACTGGCGGGCTTTCCTCGAAACGCAGCTGCGCCTTGCCGGCGGC
AGCGGTGCCTTGGGCGGGGCCGCGGCGCCGCTCTGCCGCATCGACGGTTGCGCCTGA