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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03605.1|AE004459_9 (AE004459) probable transporter [Pseudomonas aeruginosa PAO1]
Identities = 254/254 (100%), Positives = 254/254 (100%)
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Sequence:
ATGTTCGAGTCCCTGAACAAAGTCATCAATGGCTACGGCCTGATCAGCGGCTTCGCCATCATCGGCGTGACC
ATGGCGGTGTCCTACTGGTTGTCGGCGCGCCTCACCCGCGGGCGCCTGCACGGCTCGGCGATCGCGATCTTC
CTCGGCCTGGTGCTGTCCTACGTCGGCGGCGTCGCCACCGGCGGGCAGAAAGGATTGGTGGACGTGCCCCTG
ATGTCCGGTATCGGCCTGCTGGGCGGCGCCATGCTGCGCGACTTCGCCATCGTCGCCACGGCCTTCGGGGTG
AATGTCGAGGAATTGCGTCGGGCAGGGGTTTCCGGGGTGGTGTCGCTGTTCCTCGGGGTCGGTTCGTCGTTC
GTCGCCGGGGTCGCGGTGGCCATGGCGTTCGGCTACACCGATGCGGTCAGCCTGACCACCATCGGCGCCGGC
GCGGTCACCTACATCGTCGGACCGGTGACCGGCGCCGCCCTGGGGGCCAGCTCCGAGGTGATGGCGCTGAGC
ATCGCCGCCGGGCTGGTGAAGGCGATCCTGGTGATGGTCCTGACGCCTTTCGTCGCGCCCTACATCGGCCTG
AACAATCCACGTACGGCGGTGATCTTCGGTGGTCTCATGGGCACCTCCAGTGGCGTCGCCGGCGGCCTCGCC
GCCACCGACCCGAAGCTGGTGCCCTACGGTTGCCTGACCGCGGCGTTCTATACCGCCATCGGTTGCCTGCTG
GGGCCGTCGCTGCTGTATTTCAGCGTGCGCGGCCTGGTTGGGTGA |
Translation:
MFESLNKVINGYGLISGFAIIGVTMAVSYWLSARLTRGRLHGSAIAIFLGLVLSYVGGVATGGQKGLVDVPL
MSGIGLLGGAMLRDFAIVATAFGVNVEELRRAGVSGVVSLFLGVGSSFVAGVAVAMAFGYTDAVSLTTIGAG
AVTYIVGPVTGAALGASSEVMALSIAAGLVKAILVMVLTPFVAPYIGLNNPRTAVIFGGLMGTSSGVAGGLA
ATDPKLVPYGCLTAAFYTAIGCLLGPSLLYFSVRGLVG* |
AnnotationID:3287 | GeneID:3279 |
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Modification Date/Time: |
2005-03-23 12:12:31 |
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GeneProduct: | putative malonate transporter, MadM subunit |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane proteins |
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Homology: | >gb|AAO58506.1| (AE016874) malonate transporter, MadM subunit [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 254
Score = 328 bits (842), Expect = 1e-89
Identities = 166/254 (65%), Positives = 203/254 (79%)
>dbj|BAA36212.1| (AB017138) malonate transporter [Pseudomonas putida]
Length = 254
Score = 327 bits (839), Expect = 3e-89
Identities = 168/254 (66%), Positives = 199/254 (78%)
>dbj|BAC46543.1| (AP005939) malonate transporter [Bradyrhizobium japonicum USDA 110]
Length = 254
Score = 322 bits (825), Expect = 1e-87
Identities = 161/250 (64%), Positives = 203/250 (81%)
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Structural Features: | pfam03818, MadM, Malonate/sodium symporter MadM subunit.
CD-Length = 60 residues, 100.0% aligned
Score = 77.3 bits (190), Expect = 2e-15
Identities = 40/60 (66%), Positives = 48/60 (80%) |
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Comment: | "madM" is also a possible gene name |
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