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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07755.1|AE004852_8 (AE004852) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 687/687 (100%), Positives = 687/687 (100%)
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Sequence:
TTGAAACTGGACTCCCGACACAGCCTCTCGCTCAAGCTGCTGCGTGTCGTGCTACTGGCGGCGCTGGCCGTT
GGCGTAGTGCTCAGTTGCGCGCAGATCGTCTTCGACGCCTACAAGGCCAAGCAGGCGGTGAGCAGCGACGCC
CAACGCATCCTCGCGATGGTCCGCGACCCTTCCACCCAGGCGGTCTACAGCCTCGACCGGGAAATGGCGATG
CAGGTCCTCGAAGGCCTGTTCCAGCACGAGGCGGTGCGCCAGGCGAGCATCGGCCATCCCGGCGAGCCGATG
CTGGCGGAGAAATCCAGGCCGCTGCTGGACCTGCCGACGCGCTGGCTGACCGACCCGATCCTCGGCCAGGAA
CGCACCTTCAGCATTCGACTGATCGGCCGCCCGCCCTATAGCGAATACTACGGCGACCTGAAGATCACCCTG
GACACCGCGCCCTACGGCGAGAACTTCGTCACCACTTCGGAAATCATCTTCATCTCCGGCATTCTCCGCGCC
CTGGCCATGGGCCTGGTGCTGTTCCTGGTCTACCACTGGATGCTGACCAAACCGCTGTCGAAGATCATCGAG
CACCTGGTCAGCATCAATCCCGACCGCCCCAGCCAGCACCAGTTGCCGCTGCTCAAGGGGCACGAACGCAAC
GAGCTGGGGCTCTGGGTGACCACCGCCAACCAGTTGCTCGCCTCGATCGAAAGCAACAGCCACCTGCGCCGC
GAGGCCGAAGACAACCTGCTGCGCATTTCCCAGTACGACTTCCTCACCGGCCTGCCGAACCGCCAGTTGCTG
CAACAGCAACTCGACCAGATCCTCGACGGCGCCGGCCGCCAGCAGCGCCGGGTAGCAGTGCTGTGCCTGGGC
CTCGACGATTTCAAGGGGATCAACGAGCAGTACACCTACCAGCTCGGCGACCAGTTGCTGATCGCCCTCGCC
GACCGCCTGCGCGGGCACAGCGCGCGGCTCGGTTCGCTGGCGCGCCTGGGCGGCGACCAGTTCGCCCTGGTC
CAGGCCGACATCGAGCAACCCTACGAGGCGGCCGAACTGGCGCAGAGCATCCTCGACGGCCTGGAAGCGCCG
TTCGAGATCGACCAGCACGAGGTGCGCCTGCGCGCCACCATCGGTATCACCCTGTTCCCCGAGGACGGCGAG
ACCACGGAGAAACTGCTGCAGAAGGCCGAGCAGACCATGACCCTGGCCAAGACCCGCTCGCGCAACCGCTAC
CAGTTCTACATCGCCAGCGTGGACAGCGAGATGCGTCGCCGCCGGGAACTGGAAAAGGACCTGCGCGACGCC
CTGCAGCGCCACGAGCTGCACCTCGTCTACCAGCCGCAGGTGGACTACCGCGACCACCGCGTGGTCGGCGTC
GAGGCACTGCTGCGCTGGCAACATCCGTTGCACGGCTTCGTCCCGCCGGACCTGTTCATCCCGCTGGCGGAA
CAGAACGGCAGCATCTTCAGCATCGGCGAGTGGGTGCTCGACCAGGCCTGCCGGCAATTGCGCGAATGGCAC
GACCAGGGCTTCGACGACCTGCGCATGGCGGTCAATCTTTCCACCGTGCAGCTCCACCACAACGCCCTGCCA
CGGGTGGTCAGCAACCTGCTGCAGGTCTACCGCCTGCCGGCGCGCAGCCTGGAGCTGGAAGTCACCGAGACC
GGCCTGATGGAGGACATCTCCACTGCCGCCCAGCACCTCCTCAGCCTGCGCCGCGCCGGCGCGCTGATCGCC
ATCGACGATTTCGGCACCGGCTATTCCTCGCTGAGCTACCTGAAGAGCCTGCCGCTGGACAAGATCAAGATC
GACAAGAGTTTCGTCCAGGACCTGCTGCAGGACGAGGACGACGCGACCATCGTTCGCGCCATCATCCAGCTC
GGCAAGAGCCTGGGCATGCAGGTGATCGCCGAGGGCGTGGAAACCGCCGAGCAGGAGGCGTACATCATCGCC
GAAGGTTGCAACGAAGGTCAGGGCTACCTGTACAGCAAGCCGCTGCCGGCCAGGGAACTGACCCAGTACCTC
AAGCAGGCGCGACGCCTGAGCCAGGCCACCAGCAGCGAACGGCCCTGA |
Translation:
MKLDSRHSLSLKLLRVVLLAALAVGVVLSCAQIVFDAYKAKQAVSSDAQRILAMVRDPSTQAVYSLDREMAM
QVLEGLFQHEAVRQASIGHPGEPMLAEKSRPLLDLPTRWLTDPILGQERTFSIRLIGRPPYSEYYGDLKITL
DTAPYGENFVTTSEIIFISGILRALAMGLVLFLVYHWMLTKPLSKIIEHLVSINPDRPSQHQLPLLKGHERN
ELGLWVTTANQLLASIESNSHLRREAEDNLLRISQYDFLTGLPNRQLLQQQLDQILDGAGRQQRRVAVLCLG
LDDFKGINEQYTYQLGDQLLIALADRLRGHSARLGSLARLGGDQFALVQADIEQPYEAAELAQSILDGLEAP
FEIDQHEVRLRATIGITLFPEDGETTEKLLQKAEQTMTLAKTRSRNRYQFYIASVDSEMRRRRELEKDLRDA
LQRHELHLVYQPQVDYRDHRVVGVEALLRWQHPLHGFVPPDLFIPLAEQNGSIFSIGEWVLDQACRQLREWH
DQGFDDLRMAVNLSTVQLHHNALPRVVSNLLQVYRLPARSLELEVTETGLMEDISTAAQHLLSLRRAGALIA
IDDFGTGYSSLSYLKSLPLDKIKIDKSFVQDLLQDEDDATIVRAIIQLGKSLGMQVIAEGVETAEQEAYIIA
EGCNEGQGYLYSKPLPARELTQYLKQARRLSQATSSERP* |
AnnotationID:337 | GeneID:327 |
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Modification Date/Time: |
2005-05-02 09:09:13 |
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GeneProduct: | putative GGDEF domain/EAL domain protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (28) Two-component regulatory systems |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | signal transduction mechanism |
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Homology: | >gb|AAN66539.1|AE016282_7 (AE016777) GGDEF domain protein [Pseudomonas putida KT2440]
Length = 693
Score = 1120 bits (2897), Expect = 0.0
Identities = 561/677 (82%), Positives = 620/677 (91%)
>gb|AAO57815.1| (AE016871) GGDEF domain/EAL domain protein [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 683
Score = 1104 bits (2856), Expect = 0.0
Identities = 550/682 (80%), Positives = 617/682 (90%)
>gb|AAN53426.1|AE015481_9 (AE015481) sensory box protein [Shewanella oneidensis MR-1]
Length = 1515
Score = 356 bits (914), Expect = 2e-97
Identities = 188/436 (43%), Positives = 275/436 (63%), Gaps = 1/436 (0%) |
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Structural Features: | pfam00563, EAL, EAL domain.
CD-Length = 247 residues, 100.0% aligned
Score = 303 bits (778), Expect = 8e-83
Identities = 133/247 (53%), Positives = 170/247 (68%)
COG2200, Rtn, FOG: EAL domain [Signal transduction mechanisms]
CD-Length = 256 residues, 99.6% aligned
Score = 297 bits (761), Expect = 8e-81
Identities = 135/257 (52%), Positives = 166/257 (64%), Gaps = 2/257 (0%) |
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