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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08886.1|AE004962_10 (AE004962) permease of ABC zinc transporter ZnuB [Pseudomonas aeruginosa PAO1]
Identities = 262/262 (100%), Positives = 262/262 (100%)
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Sequence:
ATGGCTGACTTCCTGCTCAACGCCCTCCTCGCCGGCCTCGCCCTGGCCCTGGTGGCCGGCCCCCTGGGCTCC
TTCGTGGTCTGGCGACGGATGGCCTATTTCGGCGATACCCTGTCCCACGCCGCACTGCTCGGGGTAGCCCTG
GGTTTCCTCCTCGATGTCAGCCCGACCCTGGCTGTGACCGTCGGCTGCGTGCTGCTCGCGGTGCTGCTGGTG
ACCCTGCAGCAGCGCCAGCCGCTGGCCGCCGACACCCTGCTGGGCATCCTCGCCCACAGCACCCTGTCGCTG
GGCCTGGTCACCCTGAGCTTCATGAAGGAAGTGCGGGTCGACCTGATGGCCTACCTGTTCGGCGATCTGCTG
GCGGTGAGCGCCAGCGACCTGCTGTGGATAATCGCCGGCAGCGCGCTGGTCCTGGCACTGATCTGCTTCCTC
TGGCGGCCGCTGCTGGCGATCACCGTGCACGAGGAACTGGCGAAGGTGGAAGGCCTGCCGGTCGGAGCGATC
CGCCTGGCGCTGATGTTGCTGATCGCCATCGTCATCGCCGTGGCGATGAAGATCGTCGGCGTGTTGCTGATC
ACCTCGCTGCTGATCATTCCCGCCGCCGCCGCCCAGCGCCATGCCCGCAGTCCCGAGCAGATGGCGGTCGGC
GCCAGCCTGCTGGGACTGGTCGCGGTGTGCGCCGGCCTGGCCCTGTCCTGGTTCAAGGATACCCCCGCCGGC
CCCTCGATCGTGGTCAGCGCCGCCGGCCTGTTCCTGCTGAGTTTTGTCCTGCCCCGCCGCACGGTGTAG |
Translation:
MADFLLNALLAGLALALVAGPLGSFVVWRRMAYFGDTLSHAALLGVALGFLLDVSPTLAVTVGCVLLAVLLV
TLQQRQPLAADTLLGILAHSTLSLGLVTLSFMKEVRVDLMAYLFGDLLAVSASDLLWIIAGSALVLALICFL
WRPLLAITVHEELAKVEGLPVGAIRLALMLLIAIVIAVAMKIVGVLLITSLLIIPAAAAQRHARSPEQMAVG
ASLLGLVAVCAGLALSWFKDTPAGPSIVVSAAGLFLLSFVLPRRTV* |
AnnotationID:3260 | GeneID:3252 |
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Modification Date/Time: |
2005-03-21 08:08:03 |
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GeneProduct: | permease of ABC zinc transporter ZnuB |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | high-affinity zinc uptake system membrane protein |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane proteins |
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Homology: | >gb|AAO58691.1| (AE016875) zinc ABC transporter, permease protein [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 262
Score = 438 bits (1127), Expect = e-122
Identities = 228/262 (87%), Positives = 247/262 (94%)
>gb|AAN65751.1|AE016201_3 (AE016774) zinc ABC transporter, permease protein ZnuB [Pseudomonas
putida KT2440]
Length = 260
Score = 424 bits (1091), Expect = e-118
Identities = 221/260 (85%), Positives = 239/260 (91%)
>gb|AAO08691.1|AE016797_146 (AE016797) ABC-type Mn2+/Zn2+ transport system, permease component
[Vibrio vulnificus CMCP6]
Length = 265
Score = 328 bits (842), Expect = 1e-89
Identities = 172/259 (66%), Positives = 213/259 (82%) |
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Structural Features: | pfam00950, ABC-3, ABC 3 transport family.
CD-Length = 258 residues, 98.8% aligned
Score = 180 bits (459), Expect = 1e-46
Identities = 114/255 (44%), Positives = 164/255 (64%)
COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components
[Inorganic ion transport and metabolism]
CD-Length = 274 residues, 94.9% aligned
Score = 174 bits (444), Expect = 8e-45
Identities = 128/260 (49%), Positives = 173/260 (66%)
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