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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08935.1|AE004967_6 (AE004967) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 254/256 (99%), Positives = 254/256 (99%)
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Sequence:
GTGATCTCGAAACGTAATACGCCGCAACGTCGCCATGCCATCCTCGCGCTGCTTTCCGAGCAGGGCGAGGTC
AGCGTGGACGCACTCGCCAAGCGCTTTTCCACCTCGGAAGTGACCATCCGCAAGGACCTCGCCGCCATGGAA
AGCCACGGCCTGCTGTTGCGTCGCTACGGCGGTGCGGTGCCGATGCCCCAGGAACTGATCGGCGAAGCCGCA
CAGCCCGTCTCGCCCTACAAGCAGGCTATCGGTCGCGCCGCCGCGGCGCGCATCCGCGAGCATGCGCGGATC
ATCATCGACAGTGGCAGCACCACCGCGGCGATGATCCCCGAGCTTGGGCACAAGCCGGGCCTGGTGGTGATG
ACCAACTCGCTGAACGTGGTCAACGCCCTGCGCGAACTGGAGCACGAGCCGGTGCTGCTGATGACCGGGGGG
ACCTGGGATCCGCATTCCGAGTCGTTCCAGGGGCAGGTTGCCGAGCAGGTGCTGCGTTCCTATGACTTCGAC
CAACTATTCATCGGTGCCGACGGCATCGATCTCGAACGCGGGACGACCACGTTCAACGAATTGCTGGGCCTG
AGCCGGGTGATGGCCGAGGTCGCCCGCGAGGTGATCGTCATGGCCGAGGCCGACAAGGTCGGTCGGCGCATT
CCCAACCAGGAATTGCCCTGGAGCAGCATCCATACCCTGATTACCGACGAGCGCCTGGAACCTTCCGCGCGC
GAACAGATAACCGCCCGGGGCGTCACGCTGATCTGCGCCCCGGTCGAGCCCTGA |
Translation:
MISKRNTPQRRHAILALLSEQGEVSVDALAKRFSTSEVTIRKDLAAMESHGLLLRRYGGAVPMPQELIGEAA
QPVSPYKQAIGRAAAARIREHARIIIDSGSTTAAMIPELGHKPGLVVMTNSLNVVNALRELEHEPVLLMTGG
TWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLERGTTTFNELLGLSRVMAEVAREVIVMAEADKVGRRI
PNQELPWSSIHTLITDERLEPSAREQITARGVTLICAPVEP* |
AnnotationID:3239 | GeneID:3231 |
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Modification Date/Time: |
2005-03-22 07:07:32 |
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GeneProduct: | GlmR transcriptional regulator |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | transcriptional regulator, DeoR family |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN70974.1|AE016742_3 (AE016794) transcriptional regulator, DeoR family [Pseudomonas
putida KT2440]
Length = 258
Score = 431 bits (1107), Expect = e-120
Identities = 218/254 (85%), Positives = 235/254 (92%)
>gb|AAN57701.1|AE015906_8 (AE015906) transcriptional regulator, DeoR family [Shewanella
oneidensis MR-1]
Length = 256
Score = 349 bits (896), Expect = 8e-96
Identities = 174/256 (67%), Positives = 213/256 (83%)
>dbj|BAC58621.1| (AP005074) transcriptional regulator, DeoR family [Vibrio
parahaemolyticus]
Length = 253
Score = 328 bits (842), Expect = 1e-89
Identities = 169/253 (66%), Positives = 205/253 (81%), Gaps = 1/253 (0%) |
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Structural Features: | COG1349, GlpR, Transcriptional regulators of sugar metabolism
[Transcription / Carbohydrate transport and metabolism]
CD-Length = 253 residues, 99.6% aligned
Score = 218 bits (556), Expect = 6e-58
Identities = 112/253 (44%), Positives = 153/253 (60%), Gaps = 5/253 (1%)
pfam00455, DeoR, Bacterial regulatory proteins, deoR family.
CD-Length = 228 residues, 100.0% aligned
Score = 170 bits (431), Expect = 2e-43
Identities = 87/235 (37%), Positives = 124/235 (52%), Gaps = 19/235 (8%) |
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