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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04841.1|AE004574_12 (AE004574) flagellar biosynthesis protein FlhA [Pseudomonas aeruginosa PAO1]
Identities = 707/707 (100%), Positives = 707/707 (100%)
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Sequence:
GTGGATCGCACGCAACTGATCAGCAATGTGCGCAGCAACCTGGCGGGGCTGGGGCGCGGCAGCCTCGGCGTG
CCGGTCCTGCTGCTGGCCATGCTGGCGATGATGACCCTGCCGATCCCGCCATTCCTGCTGGACGTGCTGTTC
ACCTTCAACATCGCCCTGTCCATCGTCGTCCTGCTGGTCTGCGTGTACGCCCTGCGGCCGCTGGACTTCGCC
GTGTTCCCGACCATCCTGCTGGTGGCGACCCTGTTGCGCCTGGCGCTGAACGTTGCCTCGACCCGCGTGGTG
CTGCTCCACGGCCACGACGGCCATGGCGCCGCGGGCAAGGTGATCCAGGCCTTCGGCGAAGTGGTGATCGGC
GGCAACTACGTGGTCGGGGTGGTGGTGTTCGCGATCCTCATGATCATCAACTTCGTGGTGGTGACCAAGGGC
GCCGGGCGGATTTCCGAAGTCAGCGCGCGCTTCACCCTGGATGCCATGCCCGGCAAGCAGATGGCCATCGAC
GCCGACCTCAACGCCGGCCTGATCGAGCAGGAGGAAGCCAAGAAGCGCCGCAGCGAGGTGGCCCAGGAGGCC
GACTTCTACGGTTCGATGGACGGTGCCAGCAAGTTCGTCCGCGGCGACGCCATCGCCGGCCTGCTGATTCTC
TTCATCAACCTGATCGGCGGCGTCGCCATCGGCATGATCCAGCATTCGATGTCCTTCGGCGACGCCGGCAAG
GTCTACGCCCTGCTGACCATTGGTGACGGCCTGGTGGCACAACTGCCGTCGCTGCTGCTGTCGACCGCGGCG
GCGATCATGGTGACGCGGGTCTCCAGTTCCGAGGACATGGGCCAGCAGGTCAACCGGCAGATGTTCGCCTCG
CCCAAGGCGCTGGCGATTTCCGCGGCGATCCTGATTGCCATGGGCGCCGTGCCGGGCATGCCGCATGTTTCC
TTCATCGGCCTCGGCGCCCTGGCCGGCGCTGCTGCCTACTGGATCTGGCACCGGCAGAACAAGGCCAAGCAG
GTCGCCGAGCAGGAGGTACAGCGCCAGCAGGAGCTGCTGCCGGCGCAGCGTGCCCAGGAGGTCAAGGAACTG
GGCTGGGACGATGTCACCCCGGTGGACATGGTCGGCCTGGAAGTCGGCTACCGGCTGATCCCGCTGGTCGAC
CGCAACCAGGGCGGGCAACTGCTGGCGCGGATCAAGGGCGTACGCAAGAAGCTGTCCCAGGAGCTGGGCTTC
CTGATGCCCTCGGTGCACATCCGCGACAACCTCGACCTGCTGCCCAACGCCTACCGCCTGACCCTGATGGGG
GTCAGCGTGGCCGAAGCGGAGATCTATCCCGATCGCGAGCTGGCGATCAACCCCGGCCAGGTATTCGGCAGC
CTCAACGGCATCGCCGGCAAGGACCCGGCCTTCGGCCTGGAGGCGGTATGGATCGAGCCCGGCCAGCGCGAC
CAGGCGCAGTCGCTGGGCTACACCGTGGTGGATGCGAGCACCGTGGTCGCCACTCACCTGAACCAGGTGCTG
CACAAGCACGCCCACGAGCTGCTGGGCCATGAAGAAGTGCAGCAGCTCCTGCAATTGCTCGCGCGCAGCTCG
CCGAAGCTGGCGGAAGAGCTGGTGCCGGGGCTGATTTCCCTGTCCACCCTGCTCAAGGTCCTGCAGGCGCTG
CTCCAGGAGCAGGTGCCGGTGCGCGACATCCGTACCATCGCCGAGGCCATCGCCAACGTCGCTCCACGGAGT
CAAGATCCCGGCGCGATGGTCGCCGCGGTTCGCGTCGCGTTGTCCCGCGCAATCGTGCAAAGCATTGTCGGG
CTTGAGCCGGAGCTGCCTGTGATCACGCTCGAGCCGAGGTTGGAACAGATTTTGCTGAACAGCATGCAGAAG
GCCGGACAAGGCTCCGAGGACGGCATGTTGCTGGAGCCGGGGATGGCCGAGAAGCTGCAACGCTCGCTGATC
GAGAGCGCGCAACGCCAGGAGATGCTCGGTAAGCCGGCGATCCTGCTGGTTGCCGGACCGATCCGCTCGATG
ATGTCGCGCTTCGCGCGGATGGCGGTGCCCAGCATGCATGTGCTGGCCTACCAGGAAATCCCGGACAACAAG
CAAGTCACCATCGTCGCGACGGTGGGGCAGAACTGA |
Translation:
MDRTQLISNVRSNLAGLGRGSLGVPVLLLAMLAMMTLPIPPFLLDVLFTFNIALSIVVLLVCVYALRPLDFA
VFPTILLVATLLRLALNVASTRVVLLHGHDGHGAAGKVIQAFGEVVIGGNYVVGVVVFAILMIINFVVVTKG
AGRISEVSARFTLDAMPGKQMAIDADLNAGLIEQEEAKKRRSEVAQEADFYGSMDGASKFVRGDAIAGLLIL
FINLIGGVAIGMIQHSMSFGDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRVSSSEDMGQQVNRQMFAS
PKALAISAAILIAMGAVPGMPHVSFIGLGALAGAAAYWIWHRQNKAKQVAEQEVQRQQELLPAQRAQEVKEL
GWDDVTPVDMVGLEVGYRLIPLVDRNQGGQLLARIKGVRKKLSQELGFLMPSVHIRDNLDLLPNAYRLTLMG
VSVAEAEIYPDRELAINPGQVFGSLNGIAGKDPAFGLEAVWIEPGQRDQAQSLGYTVVDASTVVATHLNQVL
HKHAHELLGHEEVQQLLQLLARSSPKLAEELVPGLISLSTLLKVLQALLQEQVPVRDIRTIAEAIANVAPRS
QDPGAMVAAVRVALSRAIVQSIVGLEPELPVITLEPRLEQILLNSMQKAGQGSEDGMLLEPGMAEKLQRSLI
ESAQRQEMLGKPAILLVAGPIRSMMSRFARMAVPSMHVLAYQEIPDNKQVTIVATVGQN* |
AnnotationID:333 | GeneID:323 |
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Modification Date/Time: |
2005-02-24 12:12:11 |
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GeneProduct: | flagellar biosynthesis protein FlhA |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (16) Motility & Attachment |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | chemotaxis |
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Homology: | >gb|AAN69923.1|AE016631_2 (AE016790) flagellar biosynthetic protein FlhA [Pseudomonas putida
KT2440]
Length = 709
Score = 1161 bits (3004), Expect = 0.0
Identities = 598/708 (84%), Positives = 655/708 (92%), Gaps = 1/708 (0%)
>gb|AAO55494.1| (AE016862) flagellar biosynthesis protein FlhA [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 709
Score = 1146 bits (2965), Expect = 0.0
Identities = 588/708 (83%), Positives = 651/708 (91%), Gaps = 1/708 (0%)
>dbj|BAA15695.1| (D90830) Flagellar biosynthesis protein FlhA. [Escherichia coli]
Length = 692
Score = 736 bits (1899), Expect = 0.0
Identities = 381/684 (55%), Positives = 501/684 (73%), Gaps = 15/684 (2%)
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Structural Features: | COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA
[Cell motility and secretion / Intracellular trafficking and secretion]
CD-Length = 696 residues, 99.9% aligned
Score = 894 bits (2312), Expect = 0.0
Identities = 391/705 (55%), Positives = 513/705 (72%), Gaps = 10/705 (1%)
pfam00771, FHIPEP, FHIPEP family.
CD-Length = 655 residues, 100.0% aligned
Score = 742 bits (1917), Expect = 0.0
Identities = 337/672 (50%), Positives = 471/672 (70%), Gaps = 20/672 (2%)
COG4789, EscV, Type III secretory pathway, component EscV
[Intracellular trafficking and secretion]
CD-Length = 689 residues, 98.1% aligned
Score = 503 bits (1296), Expect = 3e-143
Identities = 244/692 (35%), Positives = 403/692 (58%), Gaps = 21/692 (3%)
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