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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAP84170.1| (AY273869) putative pili assembly chaperone [Pseudomonas aeruginosa]
Identities = 248/248 (100%), Positives = 248/248 (100%)
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Sequence:
ATGAATACTTTTCCACTGCCTCCGCTCCGTGCGGCTACGCTGGCGCTCGCCCTGCTGATACCCGCCATCCCG
GCTCAAAGCAGCGTGGTGATCATCGGTACTCGCGTGATTTATCCCGGCGACGCCCGGGAAAAGACCGTGCAG
ATGATCAATCAGGACGCATTCCCCAACGTGATCCAAGCCTGGATCGACAACGACGACCCCTCCTCCACCCCG
GAGACTGCAAACGCGCCCTTTCTGGTCAGCCCAGCGGTGACGCGCATAGCCCCCGGCAGCGGCCAGACCCTG
CGCCTCCTGTATACCGGGCTCCCGCTGCCCGAGGATCGCGAATCGTTGTTCCATCTCAATGTGCTGCAGATC
CCGCCCCGCGACCTGGCCAAGGCCGAGCGCAACCAGATGCTGCTGATGCAGCGCAGTCGACTGAAGCTGTTC
TATCGCCCCGCCGCGCTGCTTGGCGGCTCGGAGCAGCTAGTCGAGCAGTTGCACTTCAGCCTGGTGCAGGCG
AGCGGCAACTGGCGTGTGCGGGTGGACAACCCCAGCGGCTACTACGCCTCCTTCGCCGGCGCGATGCTGAGC
ATCGGCGAACGTCGCTGGCGGCTGCTGTCGAGCATGGTCCCGCCCAAAGGCCAGGCCGAGTGGGCGGCGGAA
CGCCCTTCGCCGCTCGCCCCAGGACCGGTCCAGTTGAACGCCCTCTTGATCAATGACTACGGCGCGCGAATG
GAGGTCCAGCATGTTCTGCCACGTTGA |
Translation:
MNTFPLPPLRAATLALALLIPAIPAQSSVVIIGTRVIYPGDAREKTVQMINQDAFPNVIQAWIDNDDPSSTP
ETANAPFLVSPAVTRIAPGSGQTLRLLYTGLPLPEDRESLFHLNVLQIPPRDLAKAERNQMLLMQRSRLKLF
YRPAALLGGSEQLVEQLHFSLVQASGNWRVRVDNPSGYYASFAGAMLSIGERRWRLLSSMVPPKGQAEWAAE
RPSPLAPGPVQLNALLINDYGARMEVQHVLPR* |
AnnotationID:3232 | GeneID:3224 |
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Modification Date/Time: |
2006-02-02 07:07:55 |
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GeneProduct: | putative pili assembly chaperone |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (16) Motility & Attachment |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >emb|CAC93345.1| (AJ414159) putative fimbrial chaperone [Yersinia pestis CO92]
Length = 243
Score = 186 bits (472), Expect = 1e-46
Identities = 93/215 (43%), Positives = 138/215 (64%), Gaps = 3/215 (1%)
>emb|CAD08797.1| (AL627266) fimbrial chaperone protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 253
Score = 154 bits (389), Expect = 4e-37
Identities = 86/236 (36%), Positives = 137/236 (58%), Gaps = 5/236 (2%)
>dbj|BAB33567.1| (AP002550) probable pilin chaperone [Escherichia coli O157:H7]
Length = 241
Score = 152 bits (385), Expect = 1e-36
Identities = 85/241 (35%), Positives = 141/241 (58%), Gaps = 9/241 (3%)
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Structural Features: | COG3121, FimC, P pilus assembly protein, chaperone PapD
[Cell motility and secretion / Intracellular trafficking and secretion].
CD-Length = 235 residues, 97.0% aligned
Score = 194 bits (495), Expect = 8e-51
Identities = 93/239 (38%), Positives = 130/239 (54%), Gaps = 11/239 (4%)
pfam00345, Pili_assembly_N, Gram-negative pili assembly chaperone,
N-terminal domain.
CD-Length = 122 residues, 99.2% aligned
Score = 126 bits (317), Expect = 3e-30
Identities = 57/125 (45%), Positives = 81/125 (64%), Gaps = 6/125 (4%) |
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