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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05217.1|AE004609_4 (AE004609) probable short-chain dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 255/255 (100%), Positives = 255/255 (100%)
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Sequence:
ATGTCCAAGACCCACCTGTTCGACCTCGACGGCAAGATCGCCTTCGTTTCCGGCGCCAGCCGCGGCATCGGC
GAGGCGATAGCCAAGCTGCTGGCCCAGCAAGGCGCCCACGTGATCGTCTCGAGCCGCAAGATCGATGGCTGC
CAGGCGGTCGCCGACGCGATCACCGCGGAGGGCGGCAAGGCCACCGCGATCGCCTGCCACATCGGCGAGATG
GAGCAGATCCAGAACGTCTTCGCACAGATCCGCGAGCAGTTCGGCCGCCTCGACATCCTGGTCAACAACGCC
GCCACGAACCCGCAGTTCTGCAACGTACTGGAAACCGACCTCGGCGCCTTCCAGAAGACCGTCGACGTCAAC
ATCCGCGGCTACTACTTCATGTCCATCGAGGGCGGCAAGCTGATGAAGGAACACGGCGGCGGCAGCATCATC
AACGTGGCCTCGATCAACGGCGTATCGCCCGGCGAGTTCCAGGGCATCTACTCGGTGACCAAGGCCGCCGTG
ATCAGCATGACCAAGGTCTTCGCCAAGGAATGCGCGCAGTTCGGCATCCGCTGCAACGCCCTCCTGCCAGGG
TTGACCGACACCAAGTTCGCTTCGGCGCTGGTGAAGAACGACGCGATCCGCAACCTCGCCCTGCAGCGCATC
CCGCTCAAGCGCGTGGCCGAGCCGAGCGAAATGGCAGGCGCCGTGCTCTACCTGGCTAGCGAAGCGTCCAGC
TACACCACCGGCGTGGCGCTGAACGTCGACGGCGGCTTCCTTTCCTGA |
Translation:
MSKTHLFDLDGKIAFVSGASRGIGEAIAKLLAQQGAHVIVSSRKIDGCQAVADAITAEGGKATAIACHIGEM
EQIQNVFAQIREQFGRLDILVNNAATNPQFCNVLETDLGAFQKTVDVNIRGYYFMSIEGGKLMKEHGGGSII
NVASINGVSPGEFQGIYSVTKAAVISMTKVFAKECAQFGIRCNALLPGLTDTKFASALVKNDAIRNLALQRI
PLKRVAEPSEMAGAVLYLASEASSYTTGVALNVDGGFLS* |
AnnotationID:3218 | GeneID:3210 |
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Modification Date/Time: |
2005-03-01 20:08:24 |
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GeneProduct: | putative short-chain dehydrogenase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (20) Putative enzymes |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | secondary metabolites, biosynthesis, transport, and catabolism |
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Homology: | >gb|AAN69520.1|AE016585_12 (AE016788) oxidoreductase, short-chain dehydrogenase/reductase
family [Pseudomonas putida KT2440]
Length = 255
Score = 446 bits (1148), Expect = e-125
Identities = 226/255 (88%), Positives = 240/255 (94%)
>gb|AAO56224.1| (AE016865) oxidoreductase, short-chain dehydrogenase/reductase
family [Pseudomonas syringae pv. tomato str. DC3000]
Length = 255
Score = 443 bits (1139), Expect = e-124
Identities = 222/255 (87%), Positives = 242/255 (94%)
>gb|AAK25038.1| (AE005971) oxidoreductase, short-chain dehydrogenase/reductase
family [Caulobacter crescentus CB15]
Length = 254
Score = 180 bits (456), Expect = 8e-45
Identities = 100/249 (40%), Positives = 150/249 (60%), Gaps = 2/249 (0%)
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Structural Features: | pfam00106, adh_short, short chain dehydrogenase.
CD-Length = 247 residues, 100.0% aligned
Score = 190 bits (484), Expect = 1e-49
Identities = 91/248 (36%), Positives = 133/248 (53%), Gaps = 9/248 (3%)
COG1028, FabG, Dehydrogenases with different specificities
(related to short-chain alcohol dehydrogenases)
[Secondary metabolites biosynthesis, transport, and catabolism]
CD-Length = 251 residues, 100.0% aligned
Score = 182 bits (463), Expect = 3e-47
Identities = 103/254 (40%), Positives = 149/254 (58%), Gaps = 9/254 (3%)
COG0300, DltE, Short-chain dehydrogenases of various substrate specificities
CD-Length = 265 residues, 83.0% aligned
Score = 138 bits (349), Expect = 6e-34
Identities = 69/227 (30%), Positives = 117/227 (51%), Gaps = 8/227 (3%) |
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