|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG08155.1|AE004890_8 (AE004890) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 257/257 (100%), Positives = 257/257 (100%)
|
Sequence:
ATGGAATTTGGTCAGGTCAGGCAGCGCCGTCTGTCGGATGACATCGTTGCGCAACTGGAGGCGATGATCCTG
GAGGGCACGCTGAAGTCCGGCGAGCGGCTGCCCGCCGAGCGCGTGCTTGCCGAGCAGTTCGGGGTTTCCCGG
CCGTCGCTGCGCGAGGCGATCCAGAAACTGGTGGCGAAGGGGCTGCTGGTCAGCCGCCAGGGTGGCGGCAAC
TATGTGACCGAATCGCTGGGCGCGACTTTCAGCGATCCGCTGCTGCACCTGCTGGAGGGTAACCCGGAGGCC
CAGCGCGACCTGCTGGAGTTTCGCCACACGCTGGAAGGGTCCTGTGCCTACTACGCGGCGCTGCGTGCGACC
TCCCTCGATCACCAGCGCCTGACCGAGGCCTTCGAGGCGCTCCAGGCCTGCTATGCGCGCAACGACCAGGTC
AGCGCGGAAGAGGGCGCCGCCGACGCGCGCTTCCACCTGGCGATCGCCGAGGCCAGCCACAACACCGTGCTG
CTGCACACCATCAAGGGCCTGTTCGACTTGCTGCGGCGCAACGTGGTGACCAATATCGGCGGGATGTACGCG
CAGCGCACGGAAACCCGCGCGCAACTGATGGAGCAGCACCAGCGCCTATACGACGCGATCATCAGCGGTCAG
GCGGAGCTGGCCCGGGAGGTGTCCAACCAGCACATCCACTATGTGCAGGAGGTCCTGGCGGAGGTCCAGGAA
GAGGCGCGCAGGATGAAGCGCTCGCAGCGCCGGCGCAGCGTGCAGGAGGACTAG |
Translation:
MEFGQVRQRRLSDDIVAQLEAMILEGTLKSGERLPAERVLAEQFGVSRPSLREAIQKLVAKGLLVSRQGGGN
YVTESLGATFSDPLLHLLEGNPEAQRDLLEFRHTLEGSCAYYAALRATSLDHQRLTEAFEALQACYARNDQV
SAEEGAADARFHLAIAEASHNTVLLHTIKGLFDLLRRNVVTNIGGMYAQRTETRAQLMEQHQRLYDAIISGQ
AELAREVSNQHIHYVQEVLAEVQEEARRMKRSQRRRSVQED* |
AnnotationID:3213 | GeneID:3205 |
|
Modification Date/Time: |
2005-03-09 11:11:18 |
|
|
|
GeneProduct: | putative transcriptional regulator, GntR family |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (25) Transcriptional regulators |
|
Alternate Gene Product Name: | putative transcriptional regulator for pyruvate dehydrogenase complex |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | |
|
|
|
|
Homology: | >gb|AAN03802.1|AF490983_2 (AF490983) probable transcription regulator [Azotobacter
vinelandii]
Length = 258
Score = 380 bits (977), Expect = e-105
Identities = 198/257 (77%), Positives = 221/257 (85%), Gaps = 1/257 (0%)
>gb|AAN70306.1|AE016671_7 (AE016791) transcriptional regulator, GntR family [Pseudomonas
putida KT2440]
Length = 255
Score = 374 bits (961), Expect = e-103
Identities = 198/252 (78%), Positives = 218/252 (86%), Gaps = 1/252 (0%)
>gb|AAN78636.1|AE016755_136 (AE016755) Pyruvate dehydrogenase complex repressor [Escherichia
coli CFT073]
Length = 265
Score = 221 bits (562), Expect = 4e-57
Identities = 120/251 (47%), Positives = 170/251 (67%), Gaps = 3/251 (1%)
|
|
Structural Features: | COG2186, FadR, Transcriptional regulators [Transcription]
CD-Length = 241 residues, 100.0% aligned
Score = 172 bits (438), Expect = 3e-44
Identities = 100/248 (40%), Positives = 137/248 (55%), Gaps = 10/248 (4%)
COG1802, GntR, Transcriptional regulators [Transcription]
CD-Length = 230 residues, 93.5% aligned
Score = 97.9 bits (243), Expect = 1e-21
Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 23/238 (9%) |
|
|
|
|
|