|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG06835.1|AE004765_8 (AE004765) probable ATP-binding component of ABC transporter [Pseudomonas aeruginosa PAO1]
Identities = 249/249 (100%), Positives = 249/249 (100%)
|
Sequence:
ATGAGCGGCCTGCTCGACCTGCTGGAGATTCGCAAGGCCTATGGCGATACGCGGGTGCTGGAGGGCGTGGCG
CTGTCGCTGGCGCCCGGCGAGGTGGTCAGCCTGCTCGGCCCCAGTGGTTGCGGCAAGAGCACCCTGCTGCGG
ATCGCCGCCGGACTGGACGATGACTTCCAGGGCACTGTCGAACGCAACCCGATCCTCGGCTTCGGCCCGGAC
GGCGAGAACGGCCGCAGCGGCGGAATCGGCGTGGTGTTCCAGGAGCCGCGCCTGTTGCCCTGGCTGACGGTG
GCGCAGAACGTCGGTTTCGCCGACGGCTGGCTGGAGGACGAGCACTGGGTCGAGCGCCTGCTCGCCGATGTC
GGACTGGCCGGCTGCGGAGGATTGCTGCCCAAGCAACTGTCCGGCGGCATGGCGCAGCGCGCGGCGATCGCT
CGCGGTCTCTACGGACGGCCGCAGGTGCTGTTGCTCGACGAGCCGTTCAGCGCGGTCGACGCCTTCACCCGC
ATGCGCCTCCAGGACCTGCTGCAGGACGTGGTGCAGAACTACGAGATCAGCGTCCTGCTGGTCACCCACGAT
CTCGACGAGGCGTTCTATCTCGCCGACCGCGTGCTGCTGATGGGCGGCCGTCCCGGACACATCCGCCGCGAG
TTCCACGTACCGCTGGCGCGTCCCCGCGATCGCCGGGCGGTGGAGCTGGCCTACTTGCGCGGCGAGGCCCTG
ACCGAAATGCAGCGGGCACACGTGCTCTGA |
Translation:
MSGLLDLLEIRKAYGDTRVLEGVALSLAPGEVVSLLGPSGCGKSTLLRIAAGLDDDFQGTVERNPILGFGPD
GENGRSGGIGVVFQEPRLLPWLTVAQNVGFADGWLEDEHWVERLLADVGLAGCGGLLPKQLSGGMAQRAAIA
RGLYGRPQVLLLDEPFSAVDAFTRMRLQDLLQDVVQNYEISVLLVTHDLDEAFYLADRVLLMGGRPGHIRRE
FHVPLARPRDRRAVELAYLRGEALTEMQRAHVL* |
AnnotationID:3210 | GeneID:3202 |
|
Modification Date/Time: |
2005-04-18 18:06:03 |
|
|
|
GeneProduct: | putative sulfonate transport system, ATP-binding protein |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (27) Transport of small molecules |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | |
|
|
|
|
Homology: | >gb|AAO56286.1| (AE016865) ABC transporter, ATP-binding protein [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 232
Score = 271 bits (692), Expect = 3e-72
Identities = 143/245 (58%), Positives = 173/245 (70%), Gaps = 13/245 (5%)
>emb|CAB12711.2| (Z99108) aliphatic sulfonate ABC transporter (binding protein)
[Bacillus subtilis subsp. subtilis str. 168]
Length = 270
Score = 194 bits (492), Expect = 5e-49
Identities = 108/236 (45%), Positives = 152/236 (64%), Gaps = 14/236 (5%)
>gb|AAN69237.1|AE016558_7 (AE016787) sulfonate ABC transporter, ATP-binding protein, putative
[Pseudomonas putida KT2440]
Length = 273
Score = 189 bits (479), Expect = 2e-47
Identities = 114/257 (44%), Positives = 154/257 (59%), Gaps = 22/257 (8%)
|
|
Structural Features: | cd00267, ABC_ATPase, ABC (ATP-binding cassette) transporter
nucleotide-binding domain
CD-Length = 217 residues, 98.6% aligned
Score = 159 bits (405), Expect = 2e-40
Identities = 87/219 (39%), Positives = 123/219 (56%), Gaps = 12/219 (5%)
pfam00005, ABC_tran, ABC transporter.
CD-Length = 183 residues, 98.4% aligned
Score = 142 bits (359), Expect = 4e-35
Identities = 77/183 (42%), Positives = 108/183 (59%), Gaps = 9/183 (4%)
COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system,
ATPase component [Inorganic ion transport and metabolism]
CD-Length = 248 residues, 98.4% aligned
Score = 271 bits (694), Expect = 6e-74
Identities = 124/252 (49%), Positives = 151/252 (59%), Gaps = 15/252 (5%)
COG4525, TauB, ABC-type taurine transport system, ATPase component
[Inorganic ion transport and metabolism]
CD-Length = 259 residues, 78.8% aligned
Score = 178 bits (454), Expect = 5e-46
Identities = 92/210 (43%), Positives = 122/210 (58%), Gaps = 11/210 (5%)
|
|
|
|
|
|