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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05391.1|AE004626_10 (AE004626) 3-hydroxybutyrate dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 254/256 (99%), Positives = 254/256 (99%)
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Sequence:
ATGACCCTGAAAGGCAAGACCGCCCTGGTCACCGGTTCCACCAGCGGCATCGGCCTGGGCATCGCCCTGAGC
CTGGCCGAGGCCGGCGCCGACCTGCTCCTCAACGGCTTCGGTGAGGTCGACGCGGCGCTGGCGCAGGTCCGC
GCCCGCGGCGTGCGCGCAGAGCACCACCCGGCCGACCTCTCCAGCCCGGAGCAGATCGGCGAACTGATGGCC
TTCGCCGAGCGGACCTTCGGCGGCGTCGACATCCTCGTCAACAACGCCGGCATCCAGTACGTGGCGCCGGTG
CAGGAATTCCCCATGGAACGCTGGGACGCGATCATCGCGATCAACCTGTCCTCGGTGTTCCATACCACCCGC
CTGGCCCTGCCGGGCATGCTCGCGCGCGGCTGGGGGCGGATCGTCAACATCGCCTCGACCCACGGCCTGGTC
GCCTCAGCCGGGAAGAGCGCCTACGTCGCCGCCAAGCATGGCGTGCTCGGCCTGACCAAGAGTGTGGCGCTG
GAAACGGCGCGCACGCCGGTGACCTGCAACGCCATCTGCCCCGGCTGGGTGCTGACCCCGCTGGTGCAGAAG
CAGATCGACGCGCGCATCGCCGAGGGCGTCTCGCCCGAACAGGCGGAACACGACCTGCTGGCGGAAAAGCAA
CCCTCGCTGGCCTTCGTCACCCCCGAGCAACTCGGCGGACTGACGCTGTTCCTTTGCAGCGAAGCCGCCGAC
CAGGTGCGCGGCGCGGCCTGGAACATGGATGGCGGCTGGGTGGCGCAGTAG |
Translation:
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRARGVRAEHHPADLSSPEQIGELMA
FAERTFGGVDILVNNAGIQYVAPVQEFPMERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLV
ASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARIAEGVSPEQAEHDLLAEKQ
PSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ* |
AnnotationID:3172 | GeneID:3164 |
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Modification Date/Time: |
2005-04-28 17:05:08 |
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GeneProduct: | 3-hydroxybutyrate dehydrogenase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (5) Carbon compound catabolism |
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Alternate Gene Product Name: | beta-hydroxybutyrate dehydrogenase |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | central intermediary metabolism |
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Homology: | >emb|CAC35773.1| (AJ310211) beta-D-hydroxybutyrate dehydrogenase [Pseudomonas
putida]
Length = 256
Score = 384 bits (985), Expect = e-106
Identities = 193/256 (75%), Positives = 213/256 (83%)
>gb|AAD33952.1|AF145230_1 (AF145230) beta-hydroxybutyrate dehydrogenase [Ralstonia eutropha]
Length = 258
Score = 346 bits (887), Expect = 9e-95
Identities = 172/257 (66%), Positives = 209/257 (81%), Gaps = 3/257 (1%)
>dbj|BAC46753.1| (AP005940) 3-hydroxybutyrate dehydrogenase [Bradyrhizobium
japonicum USDA 110]
Length = 262
Score = 281 bits (718), Expect = 3e-75
Identities = 142/260 (54%), Positives = 189/260 (72%), Gaps = 5/260 (1%) |
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Structural Features: | pfam00106, adh_short, short chain dehydrogenase.
CD-Length = 247 residues, 100.0% aligned
Score = 191 bits (487), Expect = 6e-50
Identities = 97/249 (38%), Positives = 134/249 (53%), Gaps = 5/249 (2%)
COG1028, FabG, Dehydrogenases with different specificities
(related to short-chain alcohol dehydrogenases)
[Secondary metabolites biosynthesis, transport, and catabolism]
CD-Length = 251 residues, 100.0% aligned
Score = 166 bits (422), Expect = 2e-42
Identities = 104/262 (39%), Positives = 139/262 (53%), Gaps = 19/262 (7%) |
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