Modification Date/Time: 2006-04-06 13:01:23
Missense Discrepancy: FALSE
Comments:Homology: gb|AAG08473.1| AE004921_10 (AE004921) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 236/285 (82%), Positives = 253/285 (88%)
Sequence:
ATGCGAATCTCTATTGGTCTATTCATTTTCCTGTTGAGTTTCGGAGTTCCCGCTATGGCCGACAGTAAGCCG
TTCATCTGCGTTAATGAGAAAGACCATTTGCCACCTCTCGATCCCCAGGCCGATGCCTGGTATCGGGAAGCA
GTTGCGCTAGCTAAGCCTGACGCCTTGCGTCCTTGGGGACGTATTGTGGACTTATACAGTAAGGCAGTTGAG
CGTGGGCATTGGAAGGCGATGCATAATTTGGCGAATCTTTATCGCACAGGGTGGCCCGGAGGGGTAGAAAAA
GATACGCAGAAGGCATTGGATCTCTATCAAAAGATGATCGATCTGGAGGTGCCCCAAGGGTTCTATGATATG
GGAGCAATGATCGGCAATCGTGCAGGGGTCATGAATCCTGCAACTGACGGGCTTAGTTTTCTTAATAAGGCT
GCTAGCCTAGGAAATCCGCCGGCATTAACCGAGCTAGGTAAGCTCTATATATATGTGGCCAAAAAAAAGGAT
TTGGGGTTGGCGTATACTCACTGTGCTGCTAGCCAGGGCTATGCGCCGGCTAGTTATGAGTTGGGGGCGTAT
TACAAGATAGTAGAGCATAATTTTCCAAAAGCATTGGGTTATTATCAGGCGTCAGTCTCTCAGGGCGGAAAG
AGTGCGGCTTTATTTATCTCCGGTGTTTTTGATAAAGCCAGTCCTGATGTCGATAGAATGTGGTACGCACCC
GATGAGAAATTGCGCAAATTATATGATGGTATTTACGATAAACTTGCCGCTGATCCTGATTTTCGTTTTCCC
AACTTGATAAAGGACCATCCTCTACCTTCTCACCCGACCCAGGGCTACGATGCAGATCGGCCCGACTGGAAA
CCGGGGCAGTGA
Translation:
MRISIGLFIFLLSFGVPAMADSKPFICVNEKDHLPPLDPQADAWYREAVALAKPDALRPWGRIVDLYSKAVE
RGHWKAMHNLANLYRTGWPGGVEKDTQKALDLYQKMIDLEVPQGFYDMGAMIGNRAGVMNPATDGLSFLNKA
ASLGNPPALTELGKLYIYVAKKKDLGLAYTHCAASQGYAPASYELGAYYKIVEHNFPKALGYYQASVSQGGK
SAALFISGVFDKASPDVDRMWYAPDEKLRKLYDGIYDKLAADPDFRFPNLIKDHPLPSHPTQGYDADRPDWK
PGQ*
AnnotationID:3170 GeneID:3162
Modification Date/Time:
2006-03-17 13:01:48
GeneProduct: conserved hypothetical protein
Cell Localization Confidence Code: 5
Functional Category: (14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code: 5
Secondary Functional Category(ies):
Homology: gi|9951382| gb|AAG08473.1| hypothetical protein PA5088 [Pseudomonas aeruginosa PAO1]
gi|15600281| ref|NP_253775.1| hypothetical protein PA5088 [Pseudomonas aeruginosa PAO1]
Length=293
Score = 502 bits (1293), Expect = 6e-141
Identities = 236/285 (82%), Positives = 253/285 (88%), Gaps = 0/285 (0%)
gi|9951381| gb|AAG08472.1| hypothetical protein PA5087 [Pseudomonas aeruginosa PAO1]
gi|15600280| ref|NP_253774.1| hypothetical protein PA5087 [Pseudomonas aeruginosa PAO1]
Length=289
Score = 490 bits (1261), Expect = 3e-137
Identities = 228/289 (78%), Positives = 254/289 (87%), Gaps = 0/289 (0%)
gi|9951380| gb|AAG08471.1| hypothetical protein PA5086 [Pseudomonas aeruginosa PAO1]
gi|15600279| ref|NP_253773.1| hypothetical protein PA5086 [Pseudomonas aeruginosa PAO1]
Length=213
Score = 385 bits (990), Expect = 8e-106
Identities = 183/211 (86%), Positives = 191/211 (90%), Gaps = 0/211 (0%)
Structural Features: COG0790 , FOG: TPR repeat, SEL1 subfamily [General function prediction only].
CD-Length = 292 residues, 99.7% aligned
Score = 101 bits (252), Expect = 1e-22
Comment: Neighboring genes 2807 (PA14_67190) and 3162 (PA14_67210) each have homology to PA5088 , and flank
PA5087 ortholog (2524, PA14_67200). 3162 (PA14_67210) is in the analogous position as PA5088 .