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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG04733.1|AE004564_2 (AE004564) probable short-chain dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 262/264 (99%), Positives = 263/264 (99%)
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Sequence:
ATGCAGATCGATCTGAGCGACAAACTGGCAATCGTCAGCGGTTCCACCGCCGGCATCGGCTTCGCCATCGCC
AGCGGCCTCGCCGCCGCCGGCGCCACCGTGGTGGTCAACGGACGCAGCCAGGCGGCGGTGGACCGTGCGATC
GCGGCGATCCGGAACGGCCAGCCGGATGCCAAGGTACGCGGCGTCGCCGGCGACCTGGGCACGGCGGAAGGC
TGCGCGGCTTTCGTCGCGGCCGAGCCGAAGGCGGACATCCTGGTCAACAACCTGGGCATCTTCGAGCTGAAG
GACTTCTTCGACATCGAGGACGCCGAGTGGAGCCGCTTCTTCGAGGTCAACGTGATGTCCGGGGTGCGCCTG
GCCCGCGCCTACGTCCCGGGAATGGTCGAGCGTGGTTGGGGGCGAGTGGTGTTCCTGTCTTCGGAATCGGCG
TTGAACATCCCGGCGGACATGATCCACTACGGCTTCAGCAAGACCGCCAACCTCTCGGTGTCGCGCGGCCTG
GCCAAGCGCCTGGCCGGCACCGGGGTGACGGTGAATGCGGTGCTGCCCGGACCGACCCTCACCGAAGGCGTC
GCCGAGATGCTTCGCGAGGATGCGCAGAAGGCCGGGCAGAGCATAGAAGAGGCCGGCACCGACTTTGTCCGG
CAGCACCGTTCCAGTTCGATCATCCAGCGCCTGGCGACGCCCGAGGAAGTCGCCAACCTGGTGGTCTACACC
TGCTCGACCCAGGCCTCGGCGACCACCGGCGCGGCCCTGCGGGTCGACGGCGGGGTGCTCGACAGCCTGGCC
TGA |
Translation:
MQIDLSDKLAIVSGSTAGIGFAIASGLAAAGATVVVNGRSQAAVDRAIAAIRNGQPDAKVRGVAGDLGTAEG
CAAFVAAEPKADILVNNLGIFELKDFFDIEDAEWSRFFEVNVMSGVRLARAYVPGMVERGWGRVVFLSSESA
LNIPADMIHYGFSKTANLSVSRGLAKRLAGTGVTVNAVLPGPTLTEGVAEMLREDAQKAGQSIEEAGTDFVR
QHRSSSIIQRLATPEEVANLVVYTCSTQASATTGAALRVDGGVLDSLA* |
AnnotationID:3167 | GeneID:3159 |
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Modification Date/Time: |
2005-02-23 08:08:47 |
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GeneProduct: | putative short-chain dehydrogenase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (20) Putative enzymes |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | secondary metabolites, biosynthesis, transport, and catabolism |
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Homology: | >dbj|BAB62055.1| (D85415) probable short-chain dehydrogenase [Pseudomonas putida]
Length = 264
Score = 285 bits (728), Expect = 2e-76
Identities = 146/263 (55%), Positives = 184/263 (69%)
>dbj|BAC68746.1| (AP005025) putative oxidoreductase [Streptomyces avermitilis
MA-4680]
Length = 264
Score = 280 bits (715), Expect = 8e-75
Identities = 149/263 (56%), Positives = 188/263 (71%), Gaps = 1/263 (0%)
>emb|CAD16847.1| (AL646073) PROBABLE OXIDOREDUCTASE PROTEIN [Ralstonia solanacearum]
Length = 262
Score = 276 bits (706), Expect = 9e-74
Identities = 148/262 (56%), Positives = 182/262 (69%), Gaps = 2/262 (0%) |
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Structural Features: | pfam00106, adh_short, short chain dehydrogenase.
CD-Length = 247 residues, 100.0% aligned
Score = 151 bits (383), Expect = 7e-38
Identities = 84/255 (32%), Positives = 123/255 (48%), Gaps = 13/255 (5%)
COG1028, FabG, Dehydrogenases with different specificities
(related to short-chain alcohol dehydrogenases)
[Secondary metabolites biosynthesis, transport, and catabolism]
CD-Length = 251 residues, 99.6% aligned
Score = 130 bits (327), Expect = 2e-31
Identities = 91/265 (34%), Positives = 129/265 (48%), Gaps = 23/265 (8%) |
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