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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05398.1|AE004627_6 (AE004627) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 267/267 (100%), Positives = 267/267 (100%)
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Sequence:
ATGGAAAAGAACAGCAGTCCCGCCGAAACCTCCGGCAAGCAGAAGGTCCGCTCCGCCGAAGTCGGTACCGAT
ATCCTCAAGGCCCTCGCCGAACTCTCCCCGGCGACCTCGCTGTCGCGCCTGGCGGAGCATGTGGGGATGCCG
GCGAGCAAGGTCCATCGCTATCTGCAGGCATTGATCGCCAGCGGCTTCGCGGTCCAGGACGCCTCCACCAAT
CATTACTCGCTGGGGCGCGAGGCGCTGCGCGTGGGCCTGGCGGCGCTGGACAGCATGGACGTGCTGAAGAGC
GCCGCCGCGCCGCTGGCCGAGCTGCGCGACGTGCTCAACGAGACCTGCTTCCTCGCCGTCTGGGGCAACCGT
GGAGCCACCGTGGTACAGGTGGAACAGGCGGTGCGCGCGGTGACGGTGGTCACCCAGGTCGGCTCGGTGCTG
CCGCTGCTCGGTTCGTCCACCGGCCTGGTGTTCGCCGCGTTCCTGCCGGAACGCGAGGTGGCCGAGCTGCGC
GAGGAAGAGTTGGCCGGGCGCGCCGACCATCCGCTGGCCGACCCGGCGGCCTATGCGGTGCTGCTGGAGGGC
ATCCGCGCGCGCGGCCTGCATGCGATCCATGGGCTGCTGATGCCTGGGGTGGAAGCGCTCTCGGCGCCGGTG
TTCGATGCCCGCGGGCGGGTGGCGGCGGTGCTCACGGTGGTCGGCCCGGCGAGCATCTTCCAGGCCGAGGAG
CAGGGGCCGGCGGCGGAACGGCTGCTTGCGACGACTCGGGCTATCAGTTGGCGGATGGGGTATGACGGCACC
CAGGGTGGATGA |
Translation:
MEKNSSPAETSGKQKVRSAEVGTDILKALAELSPATSLSRLAEHVGMPASKVHRYLQALIASGFAVQDASTN
HYSLGREALRVGLAALDSMDVLKSAAAPLAELRDVLNETCFLAVWGNRGATVVQVEQAVRAVTVVTQVGSVL
PLLGSSTGLVFAAFLPEREVAELREEELAGRADHPLADPAAYAVLLEGIRARGLHAIHGLLMPGVEALSAPV
FDARGRVAAVLTVVGPASIFQAEEQGPAAERLLATTRAISWRMGYDGTQGG* |
AnnotationID:3109 | GeneID:3101 |
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Modification Date/Time: |
2005-03-02 19:07:19 |
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GeneProduct: | putative transcriptional regulator, IclR family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAN70195.1|AE016659_1 (AE016791) transcriptional regulator, IclR family [Pseudomonas
putida KT2440]
Length = 277
Score = 373 bits (957), Expect = e-103
Identities = 196/263 (74%), Positives = 220/263 (83%), Gaps = 5/263 (1%)
>gb|AAO57027.1| (AE016868) transcriptional regulator, IclR family [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 263
Score = 281 bits (720), Expect = 2e-75
Identities = 154/259 (59%), Positives = 192/259 (74%), Gaps = 4/259 (1%)
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Structural Features: | COG1414, IclR, Transcriptional regulator [Transcription]
CD-Length = 246 residues, 100.0% aligned
Score = 183 bits (467), Expect = 2e-47
Identities = 95/246 (38%), Positives = 123/246 (50%), Gaps = 1/246 (0%)
pfam01614, IclR, Bacterial transcriptional regulator.
CD-Length = 188 residues, 100.0% aligned
Score = 101 bits (254), Expect = 8e-23
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 3/188 (1%) |
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