ViewGene
Locus Name:
GeneID:
Location:

GeneID:3099
TrivialName: PA14_48840
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_48840
PAO1 Ortholog Locus:PA1195
Sequence Length:765
Protein Length:254
Start: 4341250
Stop: 4342014
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04584.1|AE004549_11 (AE004549) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 254/254 (100%), Positives = 254/254 (100%)
Sequence:
ATGTTCAAGCACATCATCGCTCGCACGCCCGCCCGCAGCCTGGTCGACGGCCTGACCTCCAGCCACCTCGGC
AAGCCGGACTACGCCAAGGCCCTGGAGCAGCACAACGCCTACATCCGCGCCTTGCAGACCTGCGACGTGGAC
ATCACCCTGCTGCCGCCGGACGAACGCTTCCCCGACTCGGTGTTCGTCGAGGACCCGGTGCTCTGCACCTCG
CGCTGCGCCATCATCACCCGCCCCGGCGCCGAATCGCGGCGCGGCGAGACCGAGATCATCGAGGAGACCGTG
CAGCGCTTCTATCCGGGCAAGGTCGAGCGCATCGAGGCACCCGGCACGGTGGAAGCCGGCGACATCATGATG
GTCGGCGACCACTTCTACATCGGCGAATCGGCCCGCACCAACGCCGAGGGCGCCCGGCAGATGATCGCGATC
CTGGAGAAACATGGCCTCAGCGGCTCGGTGGTACGCCTGGAAAAGGTCCTGCACCTGAAGACCGGGCTCGCC
TACCTGGAACACAACAACCTGCTGGCCGCCGGCGAGTTCGTCAGCAAGCCGGAGTTCCAGGACTTCAACATC
ATCGAGATCCCCGAAGAGGAGTCCTACGCCGCCAACTGCATCTGGGTCAACGAAAGGGTGATCATGCCCGCC
GGCTATCCCCGGACCCGCGAGAAGATCGCCCGCCTCGGCTACCGGGTGATCGAGGTGGACACCTCCGAATAC
CGCAAGATCGACGGCGGCGTCAGTTGCATGTCACTGCGCTTCTGA
Translation:
MFKHIIARTPARSLVDGLTSSHLGKPDYAKALEQHNAYIRALQTCDVDITLLPPDERFPDSVFVEDPVLCTS
RCAIITRPGAESRRGETEIIEETVQRFYPGKVERIEAPGTVEAGDIMMVGDHFYIGESARTNAEGARQMIAI
LEKHGLSGSVVRLEKVLHLKTGLAYLEHNNLLAAGEFVSKPEFQDFNIIEIPEEESYAANCIWVNERVIMPA
GYPRTREKIARLGYRVIEVDTSEYRKIDGGVSCMSLRF*
AnnotationID:3107GeneID:3099
AnnotatorUID: diggins
Modification Date/Time: 2005-02-21 16:04:28
Gene Name:
Confidence Code:3
GeneProduct:putative dimethylarginine dimethylaminohydrolase
Cell Localization:()
Synonyms:PA1195
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(2) Amino acid biosynthesis and metabolism
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1834,pfam02274
Secondary Functional Category(ies):central intermediary metabolism
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
COG1834, COG1834, N-Dimethylarginine dimethylaminohydrolase 
[Amino acid transport and metabolism]
CD-Length = 267 residues, 100.0% aligned
Score =  251 bits (642), Expect = 1e-67
Identities = 106/268 (39%), Positives = 143/268 (53%), Gaps = 15/268 (5%)

pfam02274, Amidinotransf, Amidinotransferase.
CD-Length = 298 residues, 100.0% aligned
Score =  192 bits (489), Expect = 7e-50
Identities = 92/298 (30%), Positives = 135/298 (45%), Gaps = 44/298 (14%)







   
Genomic Context:






   
Comment:


















    ReferenceID:6201




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:23343




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:

















    ReferenceID:37560




  
Author/Investigator(s):
        





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:Misc (text/plain)







    
Data:3099_cdd.html


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:3099
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
4990
                           PA1195_tr
                           translation of PA1195
                           254
                           99.99
                           99.99
                           0
                           1314.0
     

     
     
140722
                           gb|AAG04584.1|AE004549_11
                           (AE004549) hypothetical protein PA1195 [Pseudomonas aeruginosa PAO1]
                           254
                           99.99
                           99.99
                           0
                           1314.0
     

     






      

          
GC ORFID: 46101How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA1195Glimmer Score: 

          
Start: 612658Stop: 611894

          
Length: 765


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA1195 translation of PA1195Homolog Bit Score 510.0

          
Other Homologs:  t_PA1195 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGTTCAAGCACATCATCGCTCGCACGCCCGCCCGCAGCCTGGTCGACGGCCTGACCTCCAGCCACCTCGGC 
AAGCCGGACTACGCCAAGGCCCTGGAGCAGCACAACGCCTACATCCGCGCCTTGCAGACCTGCGACGTGGAC 
ATCACCCTGCTGCCGCCGGACGAACGCTTCCCCGACTCGGTGTTCGTCGAGGACCCGGTGCTCTGCACCTCG 
CGCTGCGCCATCATCACCCGCCCCGGCGCCGAATCGCGGCGCGGCGAGACCGAGATCATCGAGGAGACCGTG 
CAGCGCTTCTATCCGGGCAAGGTCGAGCGCATCGAGGCACCCGGCACGGTGGAAGCCGGCGACATCATGATG 
GTCGGCGACCACTTCTACATCGGCGAATCGGCCCGCACCAACGCCGAGGGCGCCCGGCAGATGATCGCGATC 
CTGGAGAAACATGGCCTCAGCGGCTCGGTGGTACGCCTGGAAAAGGTCCTGCACCTGAAGACCGGGCTCGCC 
TACCTGGAACACAACAACCTGCTGGCCGCCGGCGAGTTCGTCAGCAAGCCGGAGTTCCAGGACTTCAACATC 
ATCGAGATCCCCGAAGAGGAGTCCTACGCCGCCAACTGCATCTGGGTCAACGAAAGGGTGATCATGCCCGCC 
GGCTATCCCCGGACCCGCGAGAAGATCGCCCGCCTCGGCTACCGGGTGATCGAGGTGGACACCTCCGAATAC 
CGCAAGATCGACGGCGGCGTCAGTTGCATGTCACTGCGCTTCTGA