ViewGene
Locus Name:
GeneID:
Location:

GeneID:3071
TrivialName: PA14_32610
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32610
PAO1 Ortholog Locus:PA2476
Sequence Length:771
Protein Length:256
Start: 2832396
Stop: 2833166
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05864.1|AE004675_5 (AE004675) thiol:disulfide interchange protein DsbG [Pseudomonas aeruginosa PAO1]
Identities = 256/256 (100%), Positives = 256/256 (100%)
Sequence:
ATGAGACTGCCGCGCAACCTGATCACCCTTGGCCTGGGcCTGACCCTCCTCAACGCCGGCCTGGCCACGGCG
GCGGAGGAGCTGCCGGCACCGATCCGCATGGTCCAGGAGAAGGGCGCCCGCATCCTCGGCAGCTTCGACGCC
CCGGATGGCCTGCGCGGCTACGCCGCCGAATACCAGAACCAGGGCATGGCGCTGTACCTAACGCCCGACGGC
AAGCACGTACTCACCGGCCACCTGTTCGACGCCCAGGGCAAGGACCTCAGCCGCGAACCGCTGGAGCGCCTG
GTGTATGCGCCGCTGGCCAAGGAAATGTGGCAGAAGATGGAGCAGAGCGCCTGGATCGCCGATGGCCGTGCC
GACGCGCCGCGCGTGGTCTACCTGTTCAGCGACCCGAACTGCCCGTACTGCACCATGTTCTGGGAGCAGGCG
CGACCCTGGGTGGATGCCGGCAAGGTGCAGTTGCGGCATATCATGGTCGGCATCATCCGCGAGGACAGCGAA
GCCAAGTCCGCCGCGCTGCTGGCCAGCAAGGACCCGCAGAAGGCCCTGCACGACCATGAGCAGGCGGGCAAG
GCCAGCACCCTGAAGCCGCTGGCGAAGATCCCGGCGGCGGTGCGCAAGCAGCTCGCCGGCAACATGGAACTG
ATGGAGTCGATGGGCGCCGCGGCGACCCCGGCGATCTTCTATCTCAATGCCGAGGGGCGCATGCAGCAGCAA
CAGGGCGCGCCGCAGCCGGACCAGTTGGCGGAGATCCTCGGTCCGCGTTGA
Translation:
MRLPRNLITLGLGLTLLNAGLATAAEELPAPIRMVQEKGARILGSFDAPDGLRGYAAEYQNQGMALYLTPDG
KHVLTGHLFDAQGKDLSREPLERLVYAPLAKEMWQKMEQSAWIADGRADAPRVVYLFSDPNCPYCTMFWEQA
RPWVDAGKVQLRHIMVGIIREDSEAKSAALLASKDPQKALHDHEQAGKASTLKPLAKIPAAVRKQLAGNMEL
MESMGAAATPAIFYLNAEGRMQQQQGAPQPDQLAEILGPR*
AnnotationID:3079GeneID:3071
AnnotatorUID: danlee
Modification Date/Time: 2004-03-08 17:05:14
Gene Name:dsbG
Confidence Code:2
GeneProduct:thiol:disulfide interchange protein DsbG
Cell Localization:()
Synonyms:PA2476
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(26) Translation, post-translational modification, degradation
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):Chaperones & heat shock proteins
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones]






   
Genomic Context:






   
Comment:


















    ReferenceID:6145




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:23287




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:3071
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
4954
                           PA2476_tr
                           translation of PA2476
                           256
                           99.99
                           99.99
                           0
                           1325.0
     

     
     
139871
                           gb|AAG05864.1|AE004675_5
                           (AE004675) thiol:disulfide interchange protein DsbG [Pseudomonas aeruginosa PAO1]
                           256
                           99.99
                           99.99
                           0
                           1325.0
     

     
     
139872
                           gb|AAN69817.1|AE016620_3
                           (AE016789) thiol:disulfide interchange protein DsbG [Pseudomonas putida KT2440]
                           256
                           70.31
                           81.25
                           4
                           925.0
     

     
     
139887
                           gb|AAQ60307.1|
                           (AE016919) thiol:disulfide interchange protein DsbG [Chromobacterium violaceum ATCC 12472]
                           256
                           47.65
                           64.84
                           9
                           603.0
     

     
     
139873
                           gb|AAL19558.1|
                           (AE008724) periplasmic disulfide isomerase, thiol-disulphide oxidase [Salmonella typhimurium LT2]
                           256
                           46.09
                           69.92
                           8
                           657.0
     

     






      

          
GC ORFID: 46073How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA2476Glimmer Score: 

          
Start: 2121528Stop: 2120758

          
Length: 771


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA2476 translation of PA2476Homolog Bit Score 514.0

          
Other Homologs:  t_PA2476 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGAGACTGCCGCGCAACCTGATCACCCTTGGCCTGGGcCTGACCCTCCTCAACGCCGGCCTGGCCACGGCG 
GCGGAGGAGCTGCCGGCACCGATCCGCATGGTCCAGGAGAAGGGCGCCCGCATCCTCGGCAGCTTCGACGCC 
CCGGATGGCCTGCGCGGCTACGCCGCCGAATACCAGAACCAGGGCATGGCGCTGTACCTAACGCCCGACGGC 
AAGCACGTACTCACCGGCCACCTGTTCGACGCCCAGGGCAAGGACCTCAGCCGCGAACCGCTGGAGCGCCTG 
GTGTATGCGCCGCTGGCCAAGGAAATGTGGCAGAAGATGGAGCAGAGCGCCTGGATCGCCGATGGCCGTGCC 
GACGCGCCGCGCGTGGTCTACCTGTTCAGCGACCCGAACTGCCCGTACTGCACCATGTTCTGGGAGCAGGCG 
CGACCCTGGGTGGATGCCGGCAAGGTGCAGTTGCGGCATATCATGGTCGGCATCATCCGCGAGGACAGCGAA 
GCCAAGTCCGCCGCGCTGCTGGCCAGCAAGGACCCGCAGAAGGCCCTGCACGACCATGAGCAGGCGGGCAAG 
GCCAGCACCCTGAAGCCGCTGGCGAAGATCCCGGCGGCGGTGCGCAAGCAGCTCGCCGGCAACATGGAACTG 
ATGGAGTCGATGGGCGCCGCGGCGACCCCGGCGATCTTCTATCTCAATGCCGAGGGGCGCATGCAGCAGCAA 
CAGGGCGCGCCGCAGCCGGACCAGTTGGCGGAGATCCTCGGTCCGCGTTGA