ViewGene
Locus Name:
GeneID:
Location:

GeneID:307
TrivialName: PA14_53480
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_53480
PAO1 Ortholog Locus:PA0835
Sequence Length:2115
Protein Length:704
Start: 4740071
Stop: 4742185
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04224.1|AE004518_5 (AE004518) phosphate acetyltransferase [Pseudomonas aeruginosa PAO1]
Identities = 703/704 (99%), Positives = 704/704 (100%)
Sequence:
ATGCATACCTTCTTCATCGCCCCGACCGGTTTCGGCGTCGGCCTCACCTCGATCAGCCTCGGCCTGCTTCGC
GCCCTGGAACGCGCCGGGCTGAAGGTTGGCTTCTTCAAACCCATCGCCCAGCTGCATCCCGGCGACCTCGGC
CCGGAGCGCTCCAGCGAACTGGTGGCGCGCACCCACGGCCTGGATACGCCGAAGCCGCTGCCGCTGGCCCAG
GTCGAGCGGATGCTCGGCGACGGCCAACTGGACGAACTGCTCGAAGAGATCATCAGCCTCTACCAGCGCGCC
GCCGCCGACAAGGACGTGGTGATCGTCGAAGGCATGGTACCGACCCGTCACGCCAGCTACGCCGCGCGGGTC
AACTTCCACCTGGCGAAGAGTCTCGACGCCGAGGTGATCCTGGTCTCCGCGCCGGAAAACGAGACGCTCACC
GAACTGACCGACCGTATCGAGATCCAGGCCCAGCTGTTCGGCGGCCCGCGCGACCCGAAGGTGCTCGGGGTG
ATCCTCAACAAGGTCCGCGGCGAGGCCGACGCGGCCAACGCCGAGGACGGCGTGGCGGACTTCGCCCGGCGC
CTCACCGAACACTCGCCGCTGCTGCGCGACGACTTCCGCCTGATCGGCTGCATTCCCTGGCAGGACGAACTC
AACGCCGCGCGCACCCGCGACATCGCCGATCTGCTCAGCGCACGGGTGATCAACGCCGGCGACTACGAGCAG
CGCCGGGTGCAGAAGATCGTGCTATGCGCCCGCGCCGTGCCCAACACCGTGCAACTGCTCAAGCCCGGCGTG
CTGGTGGTGACCCCCGGCGACCGCGACGACATCATCCTCGCCGCCAGCCTGGCCGCGATGAACGGCGTACCC
TTGGCCGGCCTGCTGCTGTGCAGCGACTTCCCGCCCGACCCGCGGATCATGGAACTCTGCCGCGGCGCCTTG
CAGGGAGGCCTGCCAGTGCTGTCGGTGGCCACCGGCTCCTACGACACCGCGACCAACCTGAACCGGATGAAC
AAGGAAATCCCGGTGGACGACCGCGAGCGCGCCGAGCGGGTCACCGAGTTCGTCGCCGGGCACATCGATTTC
GAATGGCTCAAGCAGCGCTGCGGTACGCCGCGCGAGCTGCGCCTGTCGCCGCCGGCGTTCCGCTACCAGGTG
GTGCAACGCGCGCAGAAGGCCGGCAAGCGCATCGTCCTGCCCGAGGGCAGCGAGCCGCGCACCGTGCAGGCG
GCGGCGATCTGCCAGGCGCGCGGCATCGCCCGCTGCGTGCTGCTGGCCAAGCCGGACGAGGTCCAGGCGGTG
GCCCAGGCCCAGGGCATCGTGCTACCGGAAGGCCTGGAGATCATCGACCCGGACCTGGTGCGGCAGCGCTAC
GTCGAACCGATGGTCGAGCTGCGCAAGGGCAAGGGGCTGAACGCGCCGATGGCGGAGCAGCAACTGGAGGAC
AGCGTGGTCCTGGCGACCATGATGCTTGCCCTGGACGAGGTCGACGGCCTGGTCTCCGGCGCCATCCACACC
ACCGCCAGCACCATCCGCCCGGCGCTGCAACTGATCAAGACCGCGCCCGGCTACAACCTGGTGTCGTCAGTG
TTTTTCATGTTGTTACCGGACCAGGTGCTGGTCTACGGCGATTGCGCGGTGAATCCCGATCCTTCGGCCAGT
GACCTGGCCGAGATCGCCGTGCAGAGTGCCGCGTCGGCGCAGGCTTTCGGCATCCCGGCACGGGTCGCGATG
ATCAGCTACTCCACCGGCGACTCCGGTTCCGGGGTGGATGTCGACAAGGTTCGCGAGGCCACCCGCCTGGCG
CGCGAGCAGCGCCCCGACCTGTTGATCGACGGACCCTTGCAGTATGATGCCGCCGCCATCGCCAGCGTCGGC
CGCCAGAAGGCGCCGAACAGCCCGGTGGCCGGGCAGGCCACGGTGTTCATCTTCCCCGACCTGAACACCGGC
AACACCACCTACAAGGCGGTGCAGCGCAGCGCCGATTGCGTCAGCGTCGGGCCGATGCTGCAAGGCCTGCGC
AAACCGGTGAACGACCTGTCGCGCGGCGCGCTGGTGGAAGACATCGTCTACACCATCGCCCTCACCGCCATC
CAGGCGGACGCCCAGGCCCCGGCCTGA
Translation:
MHTFFIAPTGFGVGLTSISLGLLRALERAGLKVGFFKPIAQLHPGDLGPERSSELVARTHGLDTPKPLPLAQ
VERMLGDGQLDELLEEIISLYQRAAADKDVVIVEGMVPTRHASYAARVNFHLAKSLDAEVILVSAPENETLT
ELTDRIEIQAQLFGGPRDPKVLGVILNKVRGEADAANAEDGVADFARRLTEHSPLLRDDFRLIGCIPWQDEL
NAARTRDIADLLSARVINAGDYEQRRVQKIVLCARAVPNTVQLLKPGVLVVTPGDRDDIILAASLAAMNGVP
LAGLLLCSDFPPDPRIMELCRGALQGGLPVLSVATGSYDTATNLNRMNKEIPVDDRERAERVTEFVAGHIDF
EWLKQRCGTPRELRLSPPAFRYQVVQRAQKAGKRIVLPEGSEPRTVQAAAICQARGIARCVLLAKPDEVQAV
AQAQGIVLPEGLEIIDPDLVRQRYVEPMVELRKGKGLNAPMAEQQLEDSVVLATMMLALDEVDGLVSGAIHT
TASTIRPALQLIKTAPGYNLVSSVFFMLLPDQVLVYGDCAVNPDPSASDLAEIAVQSAASAQAFGIPARVAM
ISYSTGDSGSGVDVDKVREATRLAREQRPDLLIDGPLQYDAAAIASVGRQKAPNSPVAGQATVFIFPDLNTG
NTTYKAVQRSADCVSVGPMLQGLRKPVNDLSRGALVEDIVYTIALTAIQADAQAPA*
AnnotationID:317GeneID:307
AnnotatorUID: danlee
Modification Date/Time: 2004-04-30 14:02:46
Gene Name:pta
Confidence Code:2
GeneProduct:phosphate acetyltransferase
Cell Localization:()
Synonyms:PA0835
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(5) Carbon compound catabolism
Alternate Gene Product Name:phosphotransacetylase
Functional Category Confidence Code:5
COGs:COG0280, pfam01515, COG0857
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Pyruvate metabolism
Homology:






 
Structural Features:
COG0280, Pta, Phosphotransacetylase. Score: 390, 8e-109
pfam01515, PTA_PTB, Phosphate acetyl/butaryl transferase. Score: 366, 9e-102
COG0857, Pta, BioD-like N-terminal domain of phosphotransacetylase.  Score: 311, 4e-85






   
Genomic Context:






   
Comment:


















    ReferenceID:617




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:17759




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:

















    ReferenceID:31975




  
Author/Investigator(s):
        Kakuda H, Hosono K, Shiroishi K, Ichihara S.





  
Title:
        Identification and characterization of the ackA (acetate kinase A)-pta (phosphotransacetylase) operon and complementation analysis of acetate utilization by an ackA-pta deletion mutant of Escherichia coli.




  
PubMed:
        95189796


MedLine:
        




    
Source:
J Biochem (Tokyo). 1994 Oct;116(4):916-22.






    
Reference Type:Journal 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:307
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
499
                           PA0835_tr
                           translation of PA0835
                           704
                           99.85
                           99.99
                           0
                           3537.0
     

     
     
25237
                           gb|AAG04224.1|AE004518_5
                           (AE004518) phosphate acetyltransferase [Pseudomonas aeruginosa PAO1]
                           704
                           99.85
                           99.99
                           0
                           3537.0
     

     
     
25238
                           gb|AAO54696.1|
                           (AE016860) phosphate acetyltransferase [Pseudomonas syringae pv. tomato str. DC3000]
                           705
                           78.29
                           87.51
                           10
                           2793.0
     

     
     
25239
                           gb|AAN66399.1|AE016267_8
                           (AE016776) phosphate acetyltransferase [Pseudomonas putida KT2440]
                           705
                           77.02
                           86.24
                           11
                           2730.0
     

     
     
25240
                           emb|CAD84209.1|
                           (BX321857) Phosphate acetyl/butaryl transferase:Phosphate acetyltransferase [Nitrosomonas europaea ATCC 19718]
                           705
                           70.92
                           83.26
                           11
                           2535.0
     

     






      

          
GC ORFID: 43309How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA0835Glimmer Score: 

          
Start: 213836Stop: 211722

          
Length: 2115


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA0835 translation of PA0835Homolog Bit Score 1367.0

          
Other Homologs:  psyr_15may02_Scaffold3_revised_gene5046 (ORF: BLASTX 1076.0), t_PA0835 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGCATACCTTCTTCATCGCCCCGACCGGTTTCGGCGTCGGCCTCACCTCGATCAGCCTCGGCCTGCTTCGC 
GCCCTGGAACGCGCCGGGCTGAAGGTTGGCTTCTTCAAACCCATCGCCCAGCTGCATCCCGGCGACCTCGGC 
CCGGAGCGCTCCAGCGAACTGGTGGCGCGCACCCACGGCCTGGATACGCCGAAGCCGCTGCCGCTGGCCCAG 
GTCGAGCGGATGCTCGGCGACGGCCAACTGGACGAACTGCTCGAAGAGATCATCAGCCTCTACCAGCGCGCC 
GCCGCCGACAAGGACGTGGTGATCGTCGAAGGCATGGTACCGACCCGTCACGCCAGCTACGCCGCGCGGGTC 
AACTTCCACCTGGCGAAGAGTCTCGACGCCGAGGTGATCCTGGTCTCCGCGCCGGAAAACGAGACGCTCACC 
GAACTGACCGACCGTATCGAGATCCAGGCCCAGCTGTTCGGCGGCCCGCGCGACCCGAAGGTGCTCGGGGTG 
ATCCTCAACAAGGTCCGCGGCGAGGCCGACGCGGCCAACGCCGAGGACGGCGTGGCGGACTTCGCCCGGCGC 
CTCACCGAACACTCGCCGCTGCTGCGCGACGACTTCCGCCTGATCGGCTGCATTCCCTGGCAGGACGAACTC 
AACGCCGCGCGCACCCGCGACATCGCCGATCTGCTCAGCGCACGGGTGATCAACGCCGGCGACTACGAGCAG 
CGCCGGGTGCAGAAGATCGTGCTATGCGCCCGCGCCGTGCCCAACACCGTGCAACTGCTCAAGCCCGGCGTG 
CTGGTGGTGACCCCCGGCGACCGCGACGACATCATCCTCGCCGCCAGCCTGGCCGCGATGAACGGCGTACCC 
TTGGCCGGCCTGCTGCTGTGCAGCGACTTCCCGCCCGACCCGCGGATCATGGAACTCTGCCGCGGCGCCTTG 
CAGGGAGGCCTGCCAGTGCTGTCGGTGGCCACCGGCTCCTACGACACCGCGACCAACCTGAACCGGATGAAC 
AAGGAAATCCCGGTGGACGACCGCGAGCGCGCCGAGCGGGTCACCGAGTTCGTCGCCGGGCACATCGATTTC 
GAATGGCTCAAGCAGCGCTGCGGTACGCCGCGCGAGCTGCGCCTGTCGCCGCCGGCGTTCCGCTACCAGGTG 
GTGCAACGCGCGCAGAAGGCCGGCAAGCGCATCGTCCTGCCCGAGGGCAGCGAGCCGCGCACCGTGCAGGCG 
GCGGCGATCTGCCAGGCGCGCGGCATCGCCCGCTGCGTGCTGCTGGCCAAGCCGGACGAGGTCCAGGCGGTG 
GCCCAGGCCCAGGGCATCGTGCTACCGGAAGGCCTGGAGATCATCGACCCGGACCTGGTGCGGCAGCGCTAC 
GTCGAACCGATGGTCGAGCTGCGCAAGGGCAAGGGGCTGAACGCGCCGATGGCGGAGCAGCAACTGGAGGAC 
AGCGTGGTCCTGGCGACCATGATGCTTGCCCTGGACGAGGTCGACGGCCTGGTCTCCGGCGCCATCCACACC 
ACCGCCAGCACCATCCGCCCGGCGCTGCAACTGATCAAGACCGCGCCCGGCTACAACCTGGTGTCGTCAGTG 
TTTTTCATGTTGTTACCGGACCAGGTGCTGGTCTACGGCGATTGCGCGGTGAATCCCGATCCTTCGGCCAGT 
GACCTGGCCGAGATCGCCGTGCAGAGTGCCGCGTCGGCGCAGGCTTTCGGCATCCCGGCACGGGTCGCGATG 
ATCAGCTACTCCACCGGCGACTCCGGTTCCGGGGTGGATGTCGACAAGGTTCGCGAGGCCACCCGCCTGGCG 
CGCGAGCAGCGCCCCGACCTGTTGATCGACGGACCCTTGCAGTATGATGCCGCCGCCATCGCCAGCGTCGGC 
CGCCAGAAGGCGCCGAACAGCCCGGTGGCCGGGCAGGCCACGGTGTTCATCTTCCCCGACCTGAACACCGGC 
AACACCACCTACAAGGCGGTGCAGCGCAGCGCCGATTGCGTCAGCGTCGGGCCGATGCTGCAAGGCCTGCGC 
AAACCGGTGAACGACCTGTCGCGCGGCGCGCTGGTGGAAGACATCGTCTACACCATCGCCCTCACCGCCATC 
CAGGCGGACGCCCAGGCCCCGGCCTGA