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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07535.1|AE004831_7 (AE004831) probable short-chain dehydrogenase [Pseudomonas aeruginosa PAO1]
Identities = 266/266 (100%), Positives = 266/266 (100%)
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Sequence:
ATGCACGCTACGTCGTCCGACGATTTCTCCCTGTCTTCCCGGGTCGCGCTGGTGACCGGCGCCGGACGCGGC
ATCGGCCGGGGCATCGCCCTCGCCCTGGCGCGCGCCGGCGCCGACGTGGCGGTGGCCGACCTCGATCCGCAG
GTCGCCGAGGAAACCGCCGCCGCGATCCGCAGCCTCGGTCGCCGCAGCCTGGCCCTTGGGGTCGACGTCAGC
GACGGCGACAGCGTCCGGGCTATGGTCGAGCGGGTCGCCACGGAGTTCGGCCGGCTCGACGTGGCGGTGAAC
AATGCCGGGGTGATCAGCATCCGCAAGGTCGCCGAACTCAGCCTCGCCGACTGGGACCGGGTGATGAACGTC
AACGCCCGCGGCGTGTTCCTCTGCTGCCAGGCCGAACTGCCGCTGATGCAGGCGCAGCGCTGGGGGCGGATC
GTCAACCTGTCATCGATCGCCGGCAAGGTCGGTCTCCCAGACCTCGCCCACTACTGTGCCTCGAAGTTTGCC
GTGATCGGTTTCAGCAATGCCCTGGCCAAGGAGGTCGCGCGCGACGGGGTGACGGTCAACGCGCTCTGCCCG
GGAATCGTCGGCACCGGAATGTGGCGCGGCGAGGACGGCTTGTCGGGCCGCTGGCGGCAGGCCGGCGAAAGC
GAGGCGCAGTCCTGGGAACGCCACCAGGCCAGCCTGCTGCCCCAGGGTGAGGCGCAGACCGTCGAAGACATG
GGCCAGCTCGTCGTCTACCTGGCCTGCGCGCCGCACGTCACCGGCCAGGCCATCGCCGTCGACGGCGGATTC
TCGCTATGA |
Translation:
MHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVADLDPQVAEETAAAIRSLGRRSLALGVDVS
DGDSVRAMVERVATEFGRLDVAVNNAGVISIRKVAELSLADWDRVMNVNARGVFLCCQAELPLMQAQRWGRI
VNLSSIAGKVGLPDLAHYCASKFAVIGFSNALAKEVARDGVTVNALCPGIVGTGMWRGEDGLSGRWRQAGES
EAQSWERHQASLLPQGEAQTVEDMGQLVVYLACAPHVTGQAIAVDGGFSL* |
AnnotationID:3037 | GeneID:3029 |
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Modification Date/Time: |
2005-03-30 16:04:38 |
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GeneProduct: | putative short-chain dehydrogenase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (20) Putative enzymes |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | secondary metabolites, biosynthesis, transport, and catabolism |
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Homology: | >gb|AAN67436.1|AE016371_2 (AE016780) oxidoreductase, short-chain dehydrogenase/reductase
family [Pseudomonas putida KT2440]
Length = 253
Score = 182 bits (463), Expect = 1e-45
Identities = 111/257 (43%), Positives = 151/257 (58%), Gaps = 14/257 (5%)
>gb|AAO42633.1| (AF373287) putative short-chain dehydrogenase [Ralstonia eutropha]
Length = 252
Score = 177 bits (450), Expect = 4e-44
Identities = 101/256 (39%), Positives = 149/256 (58%), Gaps = 17/256 (6%)
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Structural Features: | pfam00106, adh_short, short chain dehydrogenase.
CD-Length = 247 residues, 100.0% aligned
Score = 210 bits (535), Expect = 2e-55
Identities = 113/252 (44%), Positives = 145/252 (57%), Gaps = 8/252 (3%)
COG1028, FabG, Dehydrogenases with different specificities
(related to short-chain alcohol dehydrogenases)
[Secondary metabolites biosynthesis, transport, and catabolism]
CD-Length = 251 residues, 100.0% aligned
Score = 170 bits (432), Expect = 1e-43
Identities = 118/265 (44%), Positives = 152/265 (57%), Gaps = 22/265 (8%)
COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity.
CD-Length = 246 residues, 96.3% aligned
Score = 151 bits (384), Expect = 7e-38
Identities = 93/252 (36%), Positives = 132/252 (52%), Gaps = 16/252 (6%) |
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