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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03601.1|AE004459_5 (AE004459) malonate decarboxylase gamma subunit [Pseudomonas aeruginosa PAO1]
Identities = 266/268 (99%), Positives = 267/268 (99%)
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Sequence:
ATGAGCCAACCGTTCACTTCCCGTGGCCTGGCCTGGTTCCAGGCGCTGGCCGGTAGCCTCGCGCCGCGTCCC
GGCGATCCTGCTTCGTTGCGCGTCGCCGATGCCGAGCTGGACGGCTACCCGGTGCGTTTCCTGGCCGTCGTG
CCCGATCCCGACAATCCGTTCCCGCGCGCTCGCCAGGGCGAGGTCGGGCTGCTCGAGGGCTGGGGCCTGGCC
GCCGCCGTCGACGAGGCGCTGGAGGCCGACCGCGAGGCGCCGCGCAAGCGCGCGCTGCTGGCCATCGTCGAC
GTGCCGAGCCAGGCCTACGGCCGCCGCGAGGAGGCCCTGGGTATCCACCAGGCGCTGGCCGGGGCGGTGGAT
GCCTACGCCCGCGCCCGACTCGCCGGGCATCCGCTGATCGGCCTGCTGGTGGGCAAGGCGATGTCCGGTGCG
TTCCTCGCCCACGGCTACCAGGCCAACCGCCTGATCGCCTTGCACGATCCGGGGGTGATGGTCCACGCCATG
GGCAAGGCCGCCGCCGCGCGGATCACCCTGCGCAGCGTCGAGGAACTGGAGGCGTTGGCGGCGAAGGTGCCG
CCGATGGCCTACGACATCGACAGCTACGCGTCGCTCGGCCTGCTCTGGAGGACCCTTCCGGTGGAGACCGTC
GAGGTGCCGTCGACGGCGGACCTGGTGCGGGTCCGCACCTGCCTGGGCGAGGCCCTGGCCGATATCCTCGGC
GGCCCGCGCGACCTCGGCGGCCGCCTCGGCGCGGCCAACCGCGAGGCGTCGGCGCAGGTGCGCCGGCTGCTG
CGCGAGCAGTGGTGA |
Translation:
MSQPFTSRGLAWFQALAGSLAPRPGDPASLRVADAELDGYPVRFLAVVPDPDNPFPRARQGEVGLLEGWGLA
AAVDEALEADREAPRKRALLAIVDVPSQAYGRREEALGIHQALAGAVDAYARARLAGHPLIGLLVGKAMSGA
FLAHGYQANRLIALHDPGVMVHAMGKAAAARITLRSVEELEALAAKVPPMAYDIDSYASLGLLWRTLPVETV
EVPSTADLVRVRTCLGEALADILGGPRDLGGRLGAANREASAQVRRLLREQW* |
AnnotationID:3024 | GeneID:3016 |
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Modification Date/Time: |
2005-03-23 12:12:03 |
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GeneProduct: | malonate decarboxylase gamma subunit |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (5) Carbon compound catabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO58510.1| (AE016874) malonate decarboxylase, gamma subunit [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 266
Score = 367 bits (943), Expect = e-101
Identities = 188/263 (71%), Positives = 213/263 (80%)
>dbj|BAA36208.1| (AB017138) gamma subunit of malonate decarboxylase [Pseudomonas
putida]
Length = 263
Score = 362 bits (929), Expect = 1e-99
Identities = 191/262 (72%), Positives = 211/262 (80%), Gaps = 3/262 (1%) |
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Structural Features: | pfam06833, MdcE, Malonate decarboxylase gamma subunit (MdcE).
CD-Length = 234 residues, 100.0% aligned
Score = 251 bits (643), Expect = 5e-68
Identities = 127/258 (49%), Positives = 146/258 (56%), Gaps = 24/258 (9%) |
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