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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG03425.1|AE004443_3 (AE004443) tryptophan synthase alpha chain [Pseudomonas aeruginosa PAO1]
Identities = 267/268 (99%), Positives = 268/268 (100%)
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Sequence:
ATGAGCCGCCTGCAGACCCGCTTCGCCCAGCTCAAGCAGGAAAACCGCGCCGCCCTGGTGACCTTCGTCACC
GCCGGCGACCCGGACTACGCGTCTTCCCTGGAAATCCTCAAAGGCCTGCCGGCGGCCGGAGCCGACGTGATC
GAACTGGGCATGCCGTTCACCGATCCGATGGCGGACGGCCCGGCCATCCAGTTGGCCAACATCCGCGCCCTC
GACGGCGGCCAGACCCTGGCCAGGACGTTGCAGATGGTCCGCGAATTCCGCAGCGGCGACAGCGAGACACCC
CTGGTGCTGATGGGCTACTTCAACCCGATCCACCACTACGGCGTCGAGCGCTTCATCGCCGAGGCGAAGGAG
GTGGGGGTGGACGGCCTGATCGTGGTCGACCTGCCGCCGGAGCACAACGAAGACCTCTGCCACCCGGCCCAG
GCCGCCGGCCTCGACTTCATCCGCCTGACCACCCCGACCACCGGCGACCAGCGCCTGCCGACGGTGCTCGAA
GGCAGTTCCGGGTTTGTCTACTACGTGTCGGTGGCCGGCGTCACCGGCGCCAACGCGGCGACCCTGGAACAC
GTCGAGGAAGCGGTGGCGCGCCTGCGCCGGCATACCGACTTGCCGATCGGTATCGGCTTCGGCATCCGCAGC
GCCGAACACGCCGCCGCGGTCGCGCGGTTGGCCGACGGCGTGGTGGTCGGCTCGGCGCTGATCGACCGGATC
GCCAAGGCCCGCGACAATGCCCAGGCGGTCAAGGATGTCCTCGCCCTGTGCGGCGAGCTGGCCGAAGGCGTG
CGCAACGCACGCTGA |
Translation:
MSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRAL
DGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQ
AAGLDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRS
AEHAAAVARLADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR* |
AnnotationID:3023 | GeneID:3015 |
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Modification Date/Time: |
2005-03-22 14:02:26 |
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GeneProduct: | tryptophan synthase alpha chain |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (2) Amino acid biosynthesis and metabolism |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAA26013.1| (M95710) tryptophan synthase alpha subunit [Pseudomonas syringae]
Length = 269
Score = 431 bits (1107), Expect = e-120
Identities = 218/267 (81%), Positives = 238/267 (89%)
>gb|AAN65716.1|AE016198_3 (AE016774) tryptophan synthase, alpha subunit [Pseudomonas putida
KT2440]
Length = 269
Score = 401 bits (1031), Expect = e-111
Identities = 201/268 (75%), Positives = 230/268 (85%)
>gb|AAF61458.1|AF139661_3 (AF139661) tryptophan synthase alpha subunit [Azospirillum
brasilense]
Length = 284
Score = 324 bits (830), Expect = 4e-88
Identities = 164/270 (60%), Positives = 203/270 (75%), Gaps = 5/270 (1%)
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Structural Features: | COG0159, TrpA, Tryptophan synthase alpha chain
[Amino acid transport and metabolism]
CD-Length = 265 residues, 100.0% aligned
Score = 342 bits (879), Expect = 3e-95
Identities = 140/266 (52%), Positives = 190/266 (71%), Gaps = 1/266 (0%)
pfam00290, Trp_syntA, Tryptophan synthase alpha chain.
CD-Length = 260 residues, 100.0% aligned
Score = 330 bits (847), Expect = 1e-91
Identities = 131/260 (50%), Positives = 177/260 (68%), Gaps = 2/260 (0%)
cd00346, trp_synt_A, Tryptophan synthase alpha chain
CD-Length = 244 residues, 100.0% aligned
Score = 307 bits (789), Expect = 6e-85
Identities = 125/245 (51%), Positives = 165/245 (67%), Gaps = 3/245 (1%)
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