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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG08717.1|AE004946_1 (AE004946) catabolite repression control protein [Pseudomonas aeruginosa PAO1]
Identities = 259/259 (100%), Positives = 259/259 (100%)
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Sequence:
ATGCGGATCATCAGTGTGAACGTGAATGGTATTCAGGCTGCGGCCGAGCGCGGTTTGCTCAGTTGGCTGCAA
GCACAGAATGCCGACGTGATCTGCTTGCAGGACACCCGAGCCTCCGCCTTCGATCTGGATGACCCGTCCTTC
CAACTGGACGGCTACTTCCTTTATGCCTGCGATGCCGAGCTACCCGAACAGGGCGGTGTCGCACTCTACAGC
CGTTTGCAGCCCAAAGCTGTGATCAGCGGCTTAGGTTTCGAAACGGCCGATCGTTACGGGCGCTACCTGCAA
GCCGACTTCGACAAGGTGAGTATCGCCACCCTGCTGCTGCCTTCCGGGCAGAGCGGAGACGAGAGCTTGAAC
CAGAAATTCAAGTTCATGGACGACTTCACCCATTACTTGAGCAAGCAGCGTCGCAAGCGCCGCGAATACATC
TATTGCGGCTCGCTATACGTCGCCCATCAGAAGATGGACGTGAAGAACTGGCGCGAATGCCAGCAGATGCCG
GGCTTCCTCGCGCCCGAACGGGCCTGGCTGGACGAAGTGTTCGGCAACCTCGGCTATGCCGACGCCCTGCGC
GAAGTCAGCCGCGAAGGCGACCAGTTCAGCTGGTGGCCGGACAGCGAACAGGCCGAGATGCTCAACCTCGGC
TGGCGCTTCGACTACCAGGTGCTGACCCCCGGCCTGCGCCGCTTCGTGCGCAACGCCAAGCTGCCGCGCCAG
CCGCGCTTCTCCCAGCATGCGCCGCTGATCGTCGACTACGACTGGCAACTGAGCATCTGA |
Translation:
MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDAELPEQGGVALYS
RLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQSGDESLNQKFKFMDDFTHYLSKQRRKRREYI
YCGSLYVAHQKMDVKNWRECQQMPGFLAPERAWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLG
WRFDYQVLTPGLRRFVRNAKLPRQPRFSQHAPLIVDYDWQLSI* |
AnnotationID:2945 | GeneID:2937 |
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Modification Date/Time: |
2005-03-16 18:06:48 |
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GeneProduct: | catabolite repression control protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO53633.1| (AE016856) exodeoxyribonuclease III, putative [Pseudomonas syringae
pv. tomato str. DC3000]
Length = 259
Score = 478 bits (1229), Expect = e-134
Identities = 224/259 (86%), Positives = 242/259 (93%)
>gb|AAN70857.1|AE016730_3 (AE016794) catabolite repression control protein [Pseudomonas
putida KT2440]
Length = 259
Score = 476 bits (1225), Expect = e-134
Identities = 224/259 (86%), Positives = 243/259 (93%)
>gb|AAO89854.1| (AE016960) exodeoxyribonuclease III [Coxiella burnetii RSA 493]
Length = 259
Score = 236 bits (603), Expect = 7e-62
Identities = 113/258 (43%), Positives = 165/258 (63% |
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Structural Features: | COG0708, XthA, Exonuclease III [DNA replication, recombination, and repair]
CD-Length = 261 residues, 100.0% aligned
Score = 247 bits (633), Expect = 7e-67
Identities = 86/264 (32%), Positives = 135/264 (51%), Gaps = 12/264 (4%)
pfam03372, Exo_endo_phos,
Endonuclease/Exonuclease/phosphatase family.
CD-Length = 252 residues, 100.0% aligned
Score = 113 bits (284), Expect = 1e-26
Identities = 58/265 (21%), Positives = 99/265 (37%), Gaps = 25/265 (9%) |
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