ViewGene

Locus Name:
GeneID:
Location:

GeneID:2851
TrivialName: PA14_52160
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_52160
PAO1 Ortholog Locus:PA0935
Sequence Length:831
Protein Length:276
Start: 4626156
Stop: 4625326
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04324.1|AE004528_2 (AE004528) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 275/276 (99%), Positives = 275/276 (99%)
Sequence:
ATGTACCGACTCGACGACCTGCTCCACCTCATGGCGCGCCTGCGCGATCCCGAATTCGGCTGCCCCTGGGAT
CTCCAGCAGAGCTACGCGACCATCGTCCCGCACACCCTGGAAGAAGCCTACGAAGTAGCGGACGCCATAGAG
CAGGGGGATTTCCCGCAATTGCGCGAGGAACTGGGCGACCTGCTGTTCCAGGTGGTTTATTACAGCCAGTTG
GCTCGCGAAGAGGATCGCTTCGCTTTCGACGAGGTGGTGGACGGCATCACCCGCAAGCTGATCCGTCGACAT
CCCCACGTATTCCTCGATGGCGATCTCTATGGCAAGCCCGATGCGGCGAAGCTCGCCGAAGCAGCGGTCAAG
CAGCGCTGGGAAGAACTGAAGGCCGAGGAGCGTGCCGCCAAGGCCAAGGAGCCGCAGCAGTTGTCGCTGCTG
GATGACGTTCCTGTCGCCCTGCCGGCGTTGTCACGGGCGGCGAAGCTGCAGAAGCGCGCGGCGCAGGTCGGT
TTCGACTGGCCGGAAGCGCTGCCTGTGGTGGACAAGGTTCGCGAGGAGCTGGACGAAGTCCTCGAGGCGATG
GCAGAGGGTGACGAGGGTGCCGTGGGCGAGGAGGTTGGCGACCTGCTGTTCGTCGTGGTCAACCTGGCCCGG
CATCTCAAGGTCGATCCGGAGGCTGCTCTGCGCCAGGCCAACGGCAAGTTCGAGCGGCGATTCCGGTTCATC
GAGCGGAACCTGCGCGAAGCCGGCCGGAAAGCCGAAGAGTGTTCGCTGGAGGAACTGGACAGCCTCTGGGGT
GAGGCCAAGAAAGCGGAGAGGAGCGCGCCCGGCTGTTAA
Translation:
MYRLDDLLHLMARLRDPEFGCPWDLQQSYATIVPHTLEEAYEVADAIEQGDFPQLREELGDLLFQVVYYSQL
AREEDRFAFDEVVDGITRKLIRRHPHVFLDGDLYGKPDAAKLAEAAVKQRWEELKAEERAAKAKEPQQLSLL
DDVPVALPALSRAAKLQKRAAQVGFDWPEALPVVDKVREELDEVLEAMAEGDEGAVGEEVGDLLFVVVNLAR
HLKVDPEAALRQANGKFERRFRFIERNLREAGRKAEECSLEELDSLWGEAKKAERSAPGC*
AnnotationID:2859GeneID:2851
AnnotatorUID: danlee
Modification Date/Time: 2004-05-10 14:02:32
Gene Name:
Confidence Code:4
GeneProduct:conserved hypothetical protein
Cell Localization:()
Synonyms:PA0935, mazG
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG3956, COG1694
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
COG3956, Protein containing tetrapyrrole methyltransferase domain and MazG-like 
(predicted pyrophosphatase) domain
       CD-Length = 488 residues, only  52.3% aligned
       Score =  222 bits (567), Expect = 4e-59
COG1694, MazG. Score: 91.2, 1e-19
Genomic Context:
Comment:
ReferenceID:5705
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:22848
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:2851

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
4618 PA0935_tr translation of PA0935 276 99.63 99.63 0 1410.0
132857 gb|AAG04324.1|AE004528_2 (AE004528) conserved hypothetical protein [Pseudomonas aeruginosa PAO1] 276 99.63 99.63 0 1410.0
132859 gb|AAN67278.1|AE016354_5 (AE016780) MazG family protein [Pseudomonas putida KT2440] 278 74.10 84.53 3 1077.0
132858 gb|AAO55215.1| (AE016861) MazG family protein [Pseudomonas syringae pv. tomato str. DC3000] 277 72.92 84.11 1 1079.0
132875 dbj|BAB37064.1| (AP002562) hypothetical protein [Escherichia coli O157:H7] 278 52.51 65.82 17 692.0
GC ORFID: 45853How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA0935Glimmer Score:
Start: 327751Stop: 328581
Length: 831
Start Codon: ATGTruncated Start:
Stop Codon: TAATruncated Stop:
Homolog: t_PA0935 translation of PA0935Homolog Bit Score 547.0
Other Homologs: psyr_15may02_Scaffold5_revised_gene6455 (ORF: BLASTX 421.0), t_PA0935 (ORF: GLIMMER)
GC ORF Sequence
ATGTACCGACTCGACGACCTGCTCCACCTCATGGCGCGCCTGCGCGATCCCGAATTCGGCTGCCCCTGGGAT
CTCCAGCAGAGCTACGCGACCATCGTCCCGCACACCCTGGAAGAAGCCTACGAAGTAGCGGACGCCATAGAG
CAGGGGGATTTCCCGCAATTGCGCGAGGAACTGGGCGACCTGCTGTTCCAGGTGGTTTATTACAGCCAGTTG
GCTCGCGAAGAGGATCGCTTCGCTTTCGACGAGGTGGTGGACGGCATCACCCGCAAGCTGATCCGTCGACAT
CCCCACGTATTCCTCGATGGCGATCTCTATGGCAAGCCCGATGCGGCGAAGCTCGCCGAAGCAGCGGTCAAG
CAGCGCTGGGAAGAACTGAAGGCCGAGGAGCGTGCCGCCAAGGCCAAGGAGCCGCAGCAGTTGTCGCTGCTG
GATGACGTTCCTGTCGCCCTGCCGGCGTTGTCACGGGCGGCGAAGCTGCAGAAGCGCGCGGCGCAGGTCGGT
TTCGACTGGCCGGAAGCGCTGCCTGTGGTGGACAAGGTTCGCGAGGAGCTGGACGAAGTCCTCGAGGCGATG
GCAGAGGGTGACGAGGGTGCCGTGGGCGAGGAGGTTGGCGACCTGCTGTTCGTCGTGGTCAACCTGGCCCGG
CATCTCAAGGTCGATCCGGAGGCTGCTCTGCGCCAGGCCAACGGCAAGTTCGAGCGGCGATTCCGGTTCATC
GAGCGGAACCTGCGCGAAGCCGGCCGGAAAGCCGAAGAGTGTTCGCTGGAGGAACTGGACAGCCTCTGGGGT
GAGGCCAAGAAAGCGGAGAGGAGCGCGCCCGGCTGTTAA