ViewGene
Locus Name:
GeneID:
Location:

GeneID:2844
TrivialName: PA14_54640
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_54640
PAO1 Ortholog Locus:PA0745
Sequence Length:819
Protein Length:272
Start: 4844691
Stop: 4845509
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG04134.1|AE004509_9 (AE004509) probable enoyl-CoA hydratase/isomerase [Pseudomonas aeruginosa PAO1]
Identities = 272/272 (100%), Positives = 272/272 (100%)
Sequence:
ATGAACACTGCCGTCGAACCCTACAAGGCTTCCTCCTTCGACCTGACCCACAAGCTCACCGTGGAAAAGCAC
GGGCACACCGCGCTGATCACCATCAACCACCCGCCGGCCAACACCTGGGACCGCGACTCGCTGATCGGCCTG
CGCCAACTGATCGAGCACCTCAACCGCGACGACGATATCTACGCCCTGGTAGTGACCGGCCAGGGGCCGAAG
TTCTTCTCCGCCGGCGCCGACCTGAACATGTTCGCCGACGGCGACAAGGCCCGCGCTCGCGAGATGGCCCGC
CGCTTCGGCGAGGCCTTCGAGGCGCTGCGCGATTTCCGTGGGGTGTCGATCGCGGCGATCAACGGCTACGCC
ATGGGCGGCGGCCTGGAGTGCGCCCTCGCCTGCGACATCCGCATCGCCGAGCGCCAGGCGCAGATGGCCCTC
CCGGAGGCCGCGGTGGGCCTGCTGCCCTGCGCCGGCGGGACCCAGGCGCTGCCCTGGCTGGTGGGCGAAGGC
TGGGCCAAGCGGATGATCCTCTGCAACGAGCGGGTGGATGCGGAAACCGCCCTGCGCATCGGCCTGGTCGAA
CAGGTGGTGGACAGCGGCGAGGCGCGCGGCGCCGCCCTGCTGCTGGCGGCCAAGGTGGCACGCCAGAGCCCG
GTGGCGATCCGCACCATCAAGCCGCTGATCCAGGGTGCCCGCGAACGCGCGCCGAACACCTGGCTGCCGGAG
GAGCGCGAGCGCTTCGTCGATCTGTTCGACGCCCAGGACACCCGCGAAGGGGTCAACGCCTTCCTCGAGAAG
CGCGATCCCAAGTGGCGCAACTGCTGA
Translation:
MNTAVEPYKASSFDLTHKLTVEKHGHTALITINHPPANTWDRDSLIGLRQLIEHLNRDDDIYALVVTGQGPK
FFSAGADLNMFADGDKARAREMARRFGEAFEALRDFRGVSIAAINGYAMGGGLECALACDIRIAERQAQMAL
PEAAVGLLPCAGGTQALPWLVGEGWAKRMILCNERVDAETALRIGLVEQVVDSGEARGAALLLAAKVARQSP
VAIRTIKPLIQGARERAPNTWLPEERERFVDLFDAQDTREGVNAFLEKRDPKWRNC*
AnnotationID:2852GeneID:2844
AnnotatorUID: danlee
Modification Date/Time: 2004-04-14 10:10:45
Gene Name:
Confidence Code:3
GeneProduct:probable enoyl-CoA hydratase/isomerase
Cell Localization:()
Synonyms:PA0745
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:COG1024, KOG1680
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:






 
Homology:






 
Structural Features:
COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid ...  Score: 188, 1e-48
KOG1680, Enoyl-CoA hydratase [Lipid transport and met... Score: 168, 2e-42






   
Genomic Context:






   
Comment:


















    ReferenceID:5691




  
Author/Investigator(s):
        GenNotator





  
Title:
        




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:BLASTP 







    
Data:


    		




 
URL:

















    ReferenceID:22834




  
Author/Investigator(s):
        GenNotator





  
Title:
        CDD Search




  
PubMed:
        


MedLine:
        




    
Source:






    
Reference Type:RPSBLAST 







    
Data:


    		




 
URL:









           
Homologs By Global Alignment 

           

       



     
Gene ID:2844
           
Identity:

                               
                                   0%
                               
                                   10%
                               
                                   20%
                               
                                   30%
                               
                                   40%
                               
                                   50%
                               
                                   60%
                               
                                   70%
                               
                                   80%
                               
                                   90%
                               
                                   100%
                               
                             

                           

     
HomologID
                           Accession
                           Description
                           Length
                           PctIdentity
                           PctSimilarity
                           Gaps
                           Score
     

     
     
4611
                           PA0745_tr
                           translation of PA0745
                           272
                           99.99
                           99.99
                           0
                           1412.0
     

     
     
132778
                           gb|AAG04134.1|AE004509_9
                           (AE004509) probable enoyl-CoA hydratase/isomerase [Pseudomonas aeruginosa PAO1]
                           272
                           99.99
                           99.99
                           0
                           1412.0
     

     
     
132779
                           gb|AAQ59755.1|
                           (AE016917) probable enoyl-CoA hydratase [Chromobacterium violaceum ATCC 12472]
                           272
                           68.38
                           75.73
                           0
                           917.0
     

     
     
132780
                           gb|AAM36185.1|
                           (AE011762) enoyl-CoA hydratase [Xanthomonas axonopodis pv. citri str. 306]
                           274
                           61.31
                           71.53
                           11
                           828.0
     

     
     
132781
                           gb|AAN54735.1|AE015614_2
                           (AE015614) enoyl-CoA hydratase/isomerase family protein [Shewanella oneidensis MR-1]
                           273
                           60.80
                           69.96
                           17
                           814.0
     

     






      

          
GC ORFID: 45846How Found: BLASTX

          
GC_TrimmedSeqID: 69Blast Result ID

          
Subject Sequence Name: t_PA0745Glimmer Score: 

          
Start: 109216Stop: 108398

          
Length: 819


          
Start Codon: ATGTruncated Start:

          
Stop Codon: TGATruncated Stop: 

          
Homolog: t_PA0745 translation of PA0745Homolog Bit Score 548.0

          
Other Homologs:  t_PA0745 (ORF: GLIMMER)

          
GC ORF Sequence

           
ATGAACACTGCCGTCGAACCCTACAAGGCTTCCTCCTTCGACCTGACCCACAAGCTCACCGTGGAAAAGCAC 
GGGCACACCGCGCTGATCACCATCAACCACCCGCCGGCCAACACCTGGGACCGCGACTCGCTGATCGGCCTG 
CGCCAACTGATCGAGCACCTCAACCGCGACGACGATATCTACGCCCTGGTAGTGACCGGCCAGGGGCCGAAG 
TTCTTCTCCGCCGGCGCCGACCTGAACATGTTCGCCGACGGCGACAAGGCCCGCGCTCGCGAGATGGCCCGC 
CGCTTCGGCGAGGCCTTCGAGGCGCTGCGCGATTTCCGTGGGGTGTCGATCGCGGCGATCAACGGCTACGCC 
ATGGGCGGCGGCCTGGAGTGCGCCCTCGCCTGCGACATCCGCATCGCCGAGCGCCAGGCGCAGATGGCCCTC 
CCGGAGGCCGCGGTGGGCCTGCTGCCCTGCGCCGGCGGGACCCAGGCGCTGCCCTGGCTGGTGGGCGAAGGC 
TGGGCCAAGCGGATGATCCTCTGCAACGAGCGGGTGGATGCGGAAACCGCCCTGCGCATCGGCCTGGTCGAA 
CAGGTGGTGGACAGCGGCGAGGCGCGCGGCGCCGCCCTGCTGCTGGCGGCCAAGGTGGCACGCCAGAGCCCG 
GTGGCGATCCGCACCATCAAGCCGCTGATCCAGGGTGCCCGCGAACGCGCGCCGAACACCTGGCTGCCGGAG 
GAGCGCGAGCGCTTCGTCGATCTGTTCGACGCCCAGGACACCCGCGAAGGGGTCAACGCCTTCCTCGAGAAG 
CGCGATCCCAAGTGGCGCAACTGCTGA