|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG07559.1|AE004833_10 (AE004833) probable nuclease [Pseudomonas aeruginosa PAO1]
Identities = 264/266 (99%), Positives = 266/266 (100%)
|
Sequence:
GTGGACACCCTGAAGATCGCCACCTTCAACGTCAACGGCATCCAGACCCGGCTGGCCGCGCTGCTGGCCTGG
CTGGAGCGGGAAGCGCCGGACATCGTCTGCCTGCAGGAACTGAAGACGCCCGACGCGCGCTTCCCCGCCGCG
GCGCTGGAGAGGGCCGGATACGGCGCGATCTGGCAGGGCCAGTCGGCGTGGAACGGCGTCGCCATCCTCGCC
CGCGACAGCCAGCCGCTGGAGGTACGCCGCGGCCTGCCGGGCAACGCCAGCGATCCCCACAGCCGCTACCTC
GAAGCGGCCGTCGACGGCCTGCTGGTGGCCAGTCTTTACCTGCCCAATGGCAATCCCCAGCCGGGACCGAAG
TTCGACTACAAGCTGGCCTGGTTCGAGCACCTCATCCGCCACGCCGCCGAGCTGATGGAGAGCGGCCATCCG
GTGGTGCTGGCCGGCGACTTCAACGTGGTGCCCAGCGACTTCGATATCTACGACACCCGCTCCTGGAAAAAG
GACGCCCTGCTCCAGCCGGAGTCCCGCGAGTGCTTCGAGCGCCTCCTGCGGCAGGGCTGGGTGGACGCGCTA
CGCCAGCGTTTCCCCGACCGGCGCATCTATACCTTCTGGGACTACTTCCGCCAGCACTGGCAACGCGACGCC
GGGCTGCGCATCGACCACCTGCTGCTCAGCGCCAGCCTGGCGGACCACCTGGAAGACGCCGGGGTGGATCGC
TGGGTGCGCGGCGAGGAGCACGCCAGCGACCACGCACCGGCCTGGGTAAGCCTGCGGCGTCCCTCAGAGCCC
CGGCGCTAG |
Translation:
MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALERAGYGAIWQGQSAWNGVAILA
RDSQPLEVRRGLPGNASDPHSRYLEAAVDGLLVASLYLPNGNPQPGPKFDYKLAWFEHLIRHAAELMESGHP
VVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECFERLLRQGWVDALRQRFPDRRIYTFWDYFRQHWQRDA
GLRIDHLLLSASLADHLEDAGVDRWVRGEEHASDHAPAWVSLRRPSEPRR* |
AnnotationID:2839 | GeneID:2831 |
|
Modification Date/Time: |
2005-03-31 07:07:54 |
|
|
|
GeneProduct: | putative exonuclease III |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (11) DNA replication, recombination, modification and repair |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | |
|
|
|
|
Homology: | >gb|AAN68315.1|AE016465_8 (AE016784) exodeoxyribonuclease III, putative [Pseudomonas putida
KT2440]
Length = 265
Score = 388 bits (997), Expect = e-107
Identities = 182/258 (70%), Positives = 206/258 (79%)
>gb|AAM36892.1| (AE011838) exodeoxyribonuclease III [Xanthomonas axonopodis pv.
citri str. 306]
Length = 330
Score = 361 bits (926), Expect = 3e-99
Identities = 170/260 (65%), Positives = 200/260 (76%)
>emb|CAC46228.1| (AL591788) PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN [Sinorhizobium
meliloti]
Length = 264
Score = 350 bits (897), Expect = 6e-96
Identities = 160/255 (62%), Positives = 192/255 (75%)
|
|
Structural Features: | COG0708, XthA, Exonuclease III [DNA replication, recombination, and repair]
CD-Length = 261 residues, 99.6% aligned
Score = 307 bits (788), Expect = 1e-84
Identities = 120/261 (45%), Positives = 160/261 (61%), Gaps = 6/261 (2%)
pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family.
CD-Length = 252 residues, 100.0% aligned
Score = 110 bits (276), Expect = 1e-25
Identities = 72/267 (26%), Positives = 102/267 (38%), Gaps = 27/267 (10%) |
|
|
|
|
|