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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05695.1|AE004657_2 (AE004657) probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
Identities = 284/288 (98%), Positives = 285/288 (98%)
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Sequence:
ATGAGTCGAGTCACGCGCGTCCGCGAAGAATACGAAATCCAGCTCGAACCCCTGCTGGAGGTCCCCCTGGAG
CGGCGCCTGCCCCTGGGCCAGCGTCTCTGGCAACAGGGCTGGCTGCGCAAGGGGCTGATCCTGGCGCTGCTG
GCGCTGGCCTGGGAGCTGGCGGCGCGGGTCCAGGGCAACGACCTGCTGCTGCCAGGCTTCCTGCAGACGGCC
AGGGCCCTCGGCGAGGGCCTGGCCAGCGGCGAACTGCCGGCCAAGGCGGGGATCTCCCTGCTGGTGCTGTTC
AAGGGCTACCTGCTGGGGATCGTCCTGGCCTTCGTTCTGACCAGCCTGGCGGTCTCCACGCAGTTGGGCCGC
GACCTGCTCGGGACCCTCACGGCGATGTTCAACCCGCTGCCGGCGATCGCGCTGCTGCCGCTGGCGCTGCTC
TGGTTCGGCCTGGGCCAGAACAGCCTGATCTTCGTGCTGGTGCATTCGGTGCTCTGGGCGCTGGCGCTGAAC
ACCTATGCCGGTTTCCTCGGTGTCTCGGAGACCCTGCGCATGGCCGGGCGCAACTACGGCCTGCGCGGCCTG
CGCTTCGTCCTGCTGATCCTGGTGCCGGCGGCGCTGCCGTCGATTCTCGCCGGGCTGAAGATCGGCTGGGCC
TTCGCCTGGCGCACGCTGATCGCCGCGGAACTGGTGTTCGGCGCGAGCAGCGGCAAGGGCGGGCTCGGCTGG
TACATTTTCCAGAACCGCAACGAGCTGTACACCGACAAGGTATTCGCCGGCCTGGCGGTGGTGGTGCTGATC
GGCCTGCTGGTGGAGAACCTGGTGTTCGGCAGCATCGAGCGCCTCACGGTGAAGCGCTGGGGAGTGCAACGC
TAG |
Translation:
MSRVTRVREEYEIQLEPLLEVPLERRLPLGQRLWQQGWLRKGLILALLALAWELAARVQGNDLLLPGFLQTA
RALGEGLASGELPAKAGISLLVLFKGYLLGIVLAFVLTSLAVSTQLGRDLLGTLTAMFNPLPAIALLPLALL
WFGLGQNSLIFVLVHSVLWALALNTYAGFLGVSETLRMAGRNYGLRGLRFVLLILVPAALPSILAGLKIGWA
FAWRTLIAAELVFGASSGKGGLGWYIFQNRNELYTDKVFAGLAVVVLIGLLVENLVFGSIERLTVKRWGVQR
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AnnotationID:2837 | GeneID:2829 |
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Modification Date/Time: |
2005-03-04 12:12:02 |
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GeneProduct: | putative permease of ABC transporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane protein |
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Homology: | >gb|AAN65805.1|AE016209_4 (AE016774) ABC transporter, permease protein [Pseudomonas putida
KT2440]
Length = 287
Score = 482 bits (1240), Expect = e-135
Identities = 240/284 (84%), Positives = 262/284 (92%)
>emb|CAE39686.1| (BX640436) ABC transporter permease protein [Bordetella
parapertussis]
Length = 293
Score = 411 bits (1056), Expect = e-114
Identities = 210/282 (74%), Positives = 237/282 (84%), Gaps = 1/282 (0%)
>emb|CAD18659.1| (AL646085) PROBABLE TRANSMEMBRANEE ABC TRANSPORTER PROTEIN
[Ralstonia solanacearum]
Length = 298
Score = 340 bits (873), Expect = 4e-93
Identities = 171/265 (64%), Positives = 205/265 (77%)
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Structural Features: | COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system,
permease component
[Inorganic ion transport and metabolism]
CD-Length = 258 residues, 96.1% aligned
Score = 159 bits (403), Expect = 4e-40
Identities = 95/252 (37%), Positives = 127/252 (50%), Gaps = 5/252 (1%) |
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