ViewGene

Locus Name:
GeneID:
Location:

GeneID:2810
TrivialName: PA14_32600
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_32600
PAO1 Ortholog Locus:PA2477
Sequence Length:837
Protein Length:278
Start: 2831563
Stop: 2832399
Strand: +
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05865.1|AE004675_6 (AE004675) probable thiol:disulfide interchange protein [Pseudomonas aeruginosa PAO1]
Identities = 278/278 (100%), Positives = 278/278 (100%)
Sequence:
ATGCTGAGTTTTTCCCTGGGGCCGCTGGTGGTCTCGCTGCAACACCTGCTGCTGTTCCTCGCCCTCGGCGCC
GCGCTGCTCGGTGGTTGGCTGGCGGCGCGCGGCGGCGGGCGCAACGCCGAGCCGGTGCTGTTCAACCTGTTG
TTGCTCGGCCTGCTGGTGGCGCGCCTGGCCTTCGTGGTGCGCTACTGGCCGCAGTACCGTGGCGACTTCGCA
CAGATGCTGGATATCCGCGATGGCGGTTTCCTCGCCTGGCCAGGCCTGCTCGCCGCCGTGCTCGGCGCGCTG
TTCTGGGCCTGGCGGCGACCGGCGCTACGTCGCTCGCTGGGTGTCGGCGCCAGCCTCGGGCTGGCGTTCTGG
CTGCTTGGCAGCCTGGGCCTGGGCATCTACGAGCGCGGTACGCGCCTGCCCGAACTGAGCCTGCGCAACGCC
GCCGGCGAGTCGGTGCAACTGGCCGATTTCCGGGGCCGCCCGCTGGTGATCAACCTCTGGGCCAGCTGGTGC
CCGCCGTGTCGGCGTGAGATGCCGGTGCTGCAACAGGCGCAGGCGGAGAATCCCGACGTGGTGTTCCTCTTC
GCCAACCAGGGCGAGAGCGCCGAGACCGTGCGCCATTTCCTCCAGGGCGAGAACCTGCGCCTGGACAACCTG
CTGTTCGACAACGGCGGGCAGCTTGGCCAGCAGGTCGGCTCGGTCGCCTTGCCCACCACCGTTTTCTACACC
GCCGAGGGCCGCCTGCTGGGCAGCCATCTCGGCGAACTGTCCCGCGGCAGCCTGGCGCGCTACCTCGAAGCC
TTCGAGCCGGCCGCTGCCGCCCCCGCAACCAGGAGTTCCGAATGA
Translation:
MLSFSLGPLVVSLQHLLLFLALGAALLGGWLAARGGGRNAEPVLFNLLLLGLLVARLAFVVRYWPQYRGDFA
QMLDIRDGGFLAWPGLLAAVLGALFWAWRRPALRRSLGVGASLGLAFWLLGSLGLGIYERGTRLPELSLRNA
AGESVQLADFRGRPLVINLWASWCPPCRREMPVLQQAQAENPDVVFLFANQGESAETVRHFLQGENLRLDNL
LFDNGGQLGQQVGSVALPTTVFYTAEGRLLGSHLGELSRGSLARYLEAFEPAAAAPATRSSE*
AnnotationID:2818GeneID:2810
AnnotatorUID: danlee
Modification Date/Time: 2004-03-08 17:05:02
Gene Name:
Confidence Code:3
GeneProduct:probable thiol:disulfide interchange protein
Cell Localization:()
Synonyms:PA2477
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):Membrane proteins
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:5623
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:22766
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:2810

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
4555 PA2477_tr translation of PA2477 278 99.99 99.99 0 1431.0
131053 gb|AAG05865.1|AE004675_6 (AE004675) probable thiol:disulfide interchange protein [Pseudomonas aeruginosa PAO1] 278 99.99 99.99 0 1431.0
131054 gb|AAN69816.1|AE016620_2 (AE016789) thiol:disulfide interchange protein dsbE, putative [Pseudomonas putida KT2440] 279 58.06 69.89 2 820.0
131055 gb|AAO55279.1| (AE016862) conserved hypothetical protein [Pseudomonas syringae pv. tomato str. DC3000] 282 48.58 65.60 7 690.0
131056 emb|CAE32815.1| (BX640444) putative thiol:disulfide interchange protein [Bordetella bronchiseptica] [Bordetella bronchiseptica RB50] 284 44.71 55.63 19 528.0
GC ORFID: 45812How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2477Glimmer Score:
Start: 2122361Stop: 2121525
Length: 837
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2477 translation of PA2477Homolog Bit Score 555.0
Other Homologs: t_PA2477 (ORF: GLIMMER)
GC ORF Sequence
ATGCTGAGTTTTTCCCTGGGGCCGCTGGTGGTCTCGCTGCAACACCTGCTGCTGTTCCTCGCCCTCGGCGCC
GCGCTGCTCGGTGGTTGGCTGGCGGCGCGCGGCGGCGGGCGCAACGCCGAGCCGGTGCTGTTCAACCTGTTG
TTGCTCGGCCTGCTGGTGGCGCGCCTGGCCTTCGTGGTGCGCTACTGGCCGCAGTACCGTGGCGACTTCGCA
CAGATGCTGGATATCCGCGATGGCGGTTTCCTCGCCTGGCCAGGCCTGCTCGCCGCCGTGCTCGGCGCGCTG
TTCTGGGCCTGGCGGCGACCGGCGCTACGTCGCTCGCTGGGTGTCGGCGCCAGCCTCGGGCTGGCGTTCTGG
CTGCTTGGCAGCCTGGGCCTGGGCATCTACGAGCGCGGTACGCGCCTGCCCGAACTGAGCCTGCGCAACGCC
GCCGGCGAGTCGGTGCAACTGGCCGATTTCCGGGGCCGCCCGCTGGTGATCAACCTCTGGGCCAGCTGGTGC
CCGCCGTGTCGGCGTGAGATGCCGGTGCTGCAACAGGCGCAGGCGGAGAATCCCGACGTGGTGTTCCTCTTC
GCCAACCAGGGCGAGAGCGCCGAGACCGTGCGCCATTTCCTCCAGGGCGAGAACCTGCGCCTGGACAACCTG
CTGTTCGACAACGGCGGGCAGCTTGGCCAGCAGGTCGGCTCGGTCGCCTTGCCCACCACCGTTTTCTACACC
GCCGAGGGCCGCCTGCTGGGCAGCCATCTCGGCGAACTGTCCCGCGGCAGCCTGGCGCGCTACCTCGAAGCC
TTCGAGCCGGCCGCTGCCGCCCCCGCAACCAGGAGTTCCGAATGA