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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG07672.1|AE004844_4 (AE004844) exodeoxyribonuclease V beta chain [Pseudomonas aeruginosa PAO1]
Identities = 1235/1245 (99%), Positives = 1239/1245 (99%)
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Sequence:
ATGAGCCAGCAGCAGATGCCCGTGGCCCTCGATCCGCTGGATTTCCCGTTGCACGGCAGCCGCCTGATCGAG
GCCAGCGCCGGTACCGGCAAGACGTTCACCATCGCCCTGCTATACGTACGCCTGGTCCTCGACCATGGCGGC
GAGAGCGCTTTCGGCCGGCCGCTGAGCCCGCCGGAAATCCTCGTGGTGACCTTCACCGATGCGGCGACCCAG
GAACTCCGCGAGCGTATCCGCAGCCGCCTGGGCGAAGCGGCGCGTTGTTTCGCCGAGCCGCAGGAGCGCCAC
GACGGCCTGCTGGTCGCGTTGCGCCAGCAGTATCCCACCGAGCGCTGGCCGGGCTGCGCGCGCCTGCTGCGC
CTGGCCGCGGAGTGGATGGACGAGGCCGCGGTATCGACCATCCACAGTTGGTGCTACCGGATGCTGCGCGAG
CACGCCTTCGACAGCGGCAGCCTGTTCACCCAGAACCTGGAAACCGACCAGAGCGAATTGCTCGCCGAAGTG
GTGCGGGACTACTGGCGGCGCAACTTCTACGGCCTGACGGCTCCGGCGGCGCAAGCCGTGGCCAGTTGCTAC
AGTGGGCCGGAGGCGCTGGGCAAGGCCTTGCAGCCGCTGCTGGCGCGGCAGGACGCCGACTTCCGCTACGCC
GACCAGGCGCTGAGTGCGCCCGAGTCACTGGCAGCCTTGCTGGAGCAGGGCGGCGACTGGTATCGCCAGCTC
GACCAACTGGACGCGCAGGCCCGCGCCGCCTGGCGCGCAGCGCGCGTCGAACTGGAAGCGCTGCTGCGCGAC
CTGCGTCCCTACCTGAACGGCAACAGCTATCGCGGCAAGGACAGCGACGAGACCTTCGACGCCTGGCTGCAA
GCGTTGGCGGACTGGAGCGAGGGCGGCGAGCAGCCGGCCAACCTGGGCAAGTTCGGCCAGACCCGGATCAAG
CTCACCGCCAAGCGCGTGGCGCCCGAGCATGCCGCGCTAAGGGCCATCGACGCCTGGGCCGCGCATCAGGAA
GAGCGTCCCGATCTCGCTCCCCACCTGTTGTTGCACGCGCTGGGCGAAGTCGGGCGCGAACTGGAGGTCGAG
AAGCAGCGGCGTGCCGAGATCGGCTTCGACGACCTGCTCAGCCGCCTCGACCGCGCCTTGCAGGGGCCTGGT
GGCGAGCGCCTGGCGCAATTGATCCGCGAGCAGTTCCCGGTGGCGCTGATCGACGAGTTCCAGGATACCGAC
CCGGTGCAGTACCGGATCTTCGAGCGTATCTACCGGATCGCCGCCGATCCCGGCGAGCCCCAGGCGCGGGAG
ACCGGCCTGTTCATGATCGGCGACCCCAAGCAGGCGATCTACGCCTTCCGCGGTGCCGACATCCATACCTAC
CTGCGCGCCCGCGAGGCCACTCGCGGGCGGCATTACACCCTCGGCAAGAACTTCCGCTCGACCGCCGCCATG
GTGGCGGCCGCCAACCGCTGCTTCGCCTTCGCCGAAGAGCATCCGCGCGGCGCCTTCCGTTTCGCCCGCGAG
GGGCTGGAAAACCCGGTGCCGTTCCATGCGGTGGACGCCCAGGGGCGCGCCGAACGTTTGTTGATCGACGGT
GCCGAGGCGCCGGCGATGACGTTCTGGAACCTTGACGCCGAAGCCGGCGTGCTCGGCTCCGCGGCGTATCGC
CAGGAAATGGCCGAGCGCAGCGCCAGCGCCATCCGCCGCTGGCTGAGCCTGGCCGACCTGGGCCGCGCCGGC
TTCGCCGACGAGCAGGGCGGCTGGCGGGCGTTGCGCCCGGCGGATATCGCCATCCTCGTCCGCGGTCGCGCC
GAGGCCGAGGCGATCCGTAGCGCGTTGGCGGCGCGGCGTCTGGCCAGCGTCTACCTGTCCGACCGCGACTCG
GTGTTCGACAGCCAGGAGGCCGCCGACCTGCTGCACTGGCTGCGCGCCTGCGCCGATCCCGGTGCCGATGCG
CTGCTGCGGGTCGCCCTGGCTACCCGCAGCCTGCACCTGGACTGGGCGACCCTGGAACGATTGAACCAGGAC
GAACTGTTCTGGGAACGGATGGTCCTGCGCTTCCGCGACTATCGCCGGTCCTGGCAGGCCCAGGGCGTATTG
CCGATGCTGCGGCGCCTGCTCGCCGACTTCGAACTGCCGGCGCGCCTGCTGCGGTATGCCGATGGCGAGCGC
AGCCTGACCAACCTGCTGCACCTGGCCGAGTGGCTGCAGCGCGCGGCGGTGGAGCTGGACGGCGAGCACGCG
CTGATCCGCCATCTGGCCGAGCAGGTGCAGAGTCCGGGGAGCGAAGAGATCCTCCGCCTGGAAAGCGACGCC
GACCTGATCAAGGTGGTGACCATCCACAAGTCCAAGGGGCTGGAATACCCCTTGGTGCTGCTGCCCTTCATC
TGCAGCTGGAGGGAGCTGGACGGCAACAGCGGCGCGCCGGTGAGTTTCCACGAGGATGGCGCTGCAGGGCGG
GTCATCGAGCTGGCGCGGCGCAAGGAGCAGGCTGCGCGGGCCTACGAGCAGGCCAACGACGAGCGCCTCGGC
GAAGACATGCGCCTGCTCTACGTGGCCCTGACCCGCGCCCGCCATTCGGTGTGGCTGGGCATCGCGCCGCTG
GTGGCGAGCAACAGCAAGTCGCCGGAGTTGCACAAGGGGGCCCTGGGCTACCTGCTTGCCGGCGGCGCGACC
ATCGGTAGCGATGGCCTCGGCCAATGCCTCGCCGCGCTGCGCGGCGAGTGCCGGGAGATCGTCGTCGAGCCG
GCCCCCGAGGCGGACGCCGAACGCTATGTCGCAGGGCGCGGCCGGGGTCTTGGGCAGGCCCGCGAAACCCGC
CGCAGCAGCCGCGAGAAGTGGTGGGTCGCCAGCTATTCCGGCCTGCAATTGCAGGCCTCCGCCGGGCTGGAC
GATGACGAGGCGTTGGAGAGCGACGAATCGCAGGAGCCGATCAGCGCCGAGGAAGCCACCTTCCACGAAGAA
GGCCGTTCCGCCGAACAGCCGCCGGTCGCGCACGCCAGCGAGATGCGCGACGACCTGCATCGCTTCCCGCGC
GGACCGGCTCCCGGCACCTTCCTTCACGGGCTGCTCGAATGGGCCGGCCGCGAAGGCTTCGATGTGGCGCGC
GCCGATGCCCAGCGGCGCCGCGAACTGGTCGCGCGACGCTGCGACCTGCGGGGCTGGAAGGACTGGGCCGAA
CCGCTCGACCTGTGGCTGGAACAGTATCTCGCCGAACCGCTGCGCTGGCCCGGTGGCGAAACCAGCCTGGCC
GGGCTGGTCGCCTACCAGGTGGAAATGGAGTTCTGGTTCGCCACCCACCAGGTCCAGGCCGAGGCGATCGAC
GCCCTGGTCCGGCGCCATACCCTCGGCGGCGCGGCGCGTCCGGCGCTGGCGCCGACCCTGCTGAACGGCATG
TTCAAGGGCTTCGTCGACCTGGTCTTCGAGCACCAGGGGCGTTTCTACGTGGCCGACTACAAGTCCAACTGG
CTGGGCGCCGACGACGGCGCCTACAGCCCGGAAGCGATGACCGCCGCGGTGCTGGAGAACCGTTATGACCTG
CAGTACGTGTTGTACCTGCTGGCCCTGCACCGGCAGTTGAAGGCGCGCCTGCCCGACTACGACTACGACCGC
CACATGGGCGGCGCCGTGTACCTGTTCCTTCGCGGCGCCCGCGCGGCGACCCAGGGCCTGCACTTCGAGCGC
CCGCCGCGGGAACTGATCGAACGCCTGGACGCGCTGTTCAGCGGCCAGCCGGGAGCCGAGCGATGA |
Translation:
MSQQQMPVALDPLDFPLHGSRLIEASAGTGKTFTIALLYVRLVLDHGGESAFGRPLSPPEILVVTFTDAATQ
ELRERIRSRLGEAARCFAEPQERHDGLLVALRQQYPTERWPGCARLLRLAAEWMDEAAVSTIHSWCYRMLRE
HAFDSGSLFTQNLETDQSELLAEVVRDYWRRNFYGLTAPAAQAVASCYSGPEALGKALQPLLARQDADFRYA
DQALSAPESLAALLEQGGDWYRQLDQLDAQARAAWRAARVELEALLRDLRPYLNGNSYRGKDSDETFDAWLQ
ALADWSEGGEQPANLGKFGQTRIKLTAKRVAPEHAALRAIDAWAAHQEERPDLAPHLLLHALGEVGRELEVE
KQRRAEIGFDDLLSRLDRALQGPGGERLAQLIREQFPVALIDEFQDTDPVQYRIFERIYRIAADPGEPQARE
TGLFMIGDPKQAIYAFRGADIHTYLRAREATRGRHYTLGKNFRSTAAMVAAANRCFAFAEEHPRGAFRFARE
GLENPVPFHAVDAQGRAERLLIDGAEAPAMTFWNLDAEAGVLGSAAYRQEMAERSASAIRRWLSLADLGRAG
FADEQGGWRALRPADIAILVRGRAEAEAIRSALAARRLASVYLSDRDSVFDSQEAADLLHWLRACADPGADA
LLRVALATRSLHLDWATLERLNQDELFWERMVLRFRDYRRSWQAQGVLPMLRRLLADFELPARLLRYADGER
SLTNLLHLAEWLQRAAVELDGEHALIRHLAEQVQSPGSEEILRLESDADLIKVVTIHKSKGLEYPLVLLPFI
CSWRELDGNSGAPVSFHEDGAAGRVIELARRKEQAARAYEQANDERLGEDMRLLYVALTRARHSVWLGIAPL
VASNSKSPELHKGALGYLLAGGATIGSDGLGQCLAALRGECREIVVEPAPEADAERYVAGRGRGLGQARETR
RSSREKWWVASYSGLQLQASAGLDDDEALESDESQEPISAEEATFHEEGRSAEQPPVAHASEMRDDLHRFPR
GPAPGTFLHGLLEWAGREGFDVARADAQRRRELVARRCDLRGWKDWAEPLDLWLEQYLAEPLRWPGGETSLA
GLVAYQVEMEFWFATHQVQAEAIDALVRRHTLGGAARPALAPTLLNGMFKGFVDLVFEHQGRFYVADYKSNW
LGADDGAYSPEAMTAAVLENRYDLQYVLYLLALHRQLKARLPDYDYDRHMGGAVYLFLRGARAATQGLHFER
PPRELIERLDALFSGQPGAER* |
AnnotationID:38 | GeneID:28 |
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Modification Date/Time: |
2005-04-03 19:07:17 |
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GeneProduct: | exodeoxyribonuclease V beta chain |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAL79572.1| (AY078390) exonuclease V beta subunit RecB [Pseudomonas syringae]
Length = 1227
Score = 1176 bits (3042), Expect = 0.0
Identities = 681/1268 (53%), Positives = 827/1268 (65%), Gaps = 75/1268 (5%)
>gb|AAN70246.1|AE016664_2 (AE016791) exodeoxyribonuclease V, beta subunit [Pseudomonas putida
KT2440]
Length = 1224
Score = 1172 bits (3032), Expect = 0.0
Identities = 680/1254 (54%), Positives = 817/1254 (65%), Gaps = 63/1254 (5%)
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Structural Features: | COG1074, RecB, ATP-dependent exoDNAse (exonuclease V) beta subunit
(contains helicase and exonuclease domains)
[DNA replication, recombination, and repair]
CD-Length = 1139 residues, 99.8% aligned
Score = 798 bits (2062), Expect = 0.0
Identities = 419/1227 (34%), Positives = 557/1227 (45%), Gaps = 111/1227 (9%) |
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