ViewGene

Locus Name:
GeneID:
Location:

GeneID:2743
TrivialName: PA14_13360
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_13360
PAO1 Ortholog Locus:PA3907
Sequence Length:786
Protein Length:261
Start: 1150423
Stop: 1149638
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG07294.1|AE004808_4 (AE004808) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 260/261 (99%), Positives = 260/261 (99%)
Sequence:
ATGAGCGGCATAGGCGCGCTTTTCCGACCGCTGCCCCGCATGGGTCCGCGGCTGCCCTTCGAACTACCCGCG
CCGCCCCGGCCGCACTTGCCGATGCCGGCGCCGCGCCCGCTGCCGCGACCGGCCCCCGGCGCGCTGCCCAGG
CCGGTACCGCGTCCGATGCCGGTTCCGCAGACCCTGCCCAGGACCGAGACCGGCACGCTGAGCCGCGACCGG
ACCCGGGAAGCCGAGCGCGATTGCAGCAAGAGCCAGGGCCGCGACAAGGACTGCGTGGAGTGCCCGCCGTCC
CGGGGCGAAATGGCCATCGCCAATAACGGCAAGGGCCACAGCATGTCGGACCTGTCCGCGCGCTACCAGCAG
TGGGTGACCAATTTCCCGTTTCCCCACGAATGGTTCTGGAGCGGCACCTGGTGGGACGGCTTCGACGAGCCG
CGCTGCACCCTGCTGGAGGCGAAGGCCAACTACGCCTTCCTGTTCGTCCCGCTGCTCGGCGTGCCCAGGCCC
TGGGCGCGGGCCAAGGTGAAGTCGGACCTGCTGCAGAAGGCCGAGGTCCACAGCGACAAGGCCCGACCGATC
CCGCCGGTGTTCGTCGAATGGCACTTCCTGCAGCGGATCGTCTACGAGTACTGCGCCGCGGAGTACCTGCGC
ATGGGACTGGCCAACCTGAAGGCATTCTGGAATCCGATGCCGGGAACGGACGAGCACGACGACTACCAGGAA
ACCCGCGCGAAGGAACAGGAAGAGATGAAAAGGTTTTGCGAAGAGAACCCGGGGTATTGCGCATGA
Translation:
MSGIGALFRPLPRMGPRLPFELPAPPRPHLPMPAPRPLPRPAPGALPRPVPRPMPVPQTLPRTETGTLSRDR
TREAERDCSKSQGRDKDCVECPPSRGEMAIANNGKGHSMSDLSARYQQWVTNFPFPHEWFWSGTWWDGFDEP
RCTLLEAKANYAFLFVPLLGVPRPWARAKVKSDLLQKAEVHSDKARPIPPVFVEWHFLQRIVYEYCAAEYLR
MGLANLKAFWNPMPGTDEHDDYQETRAKEQEEMKRFCEENPGYCA*
AnnotationID:2751GeneID:2743
AnnotatorUID: urbach
Modification Date/Time: 2004-03-10 18:06:21
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:5489
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:22633
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:2743

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
4476 PA3907_tr translation of PA3907 261 99.61 99.61 0 1457.0
129565 gb|AAG07294.1|AE004808_4 (AE004808) hypothetical protein PA3907 [Pseudomonas aeruginosa PAO1] 261 99.61 99.61 0 1457.0
GC ORFID: 45745How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3907Glimmer Score:
Start: 3803515Stop: 3804300
Length: 786
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA3907 translation of PA3907Homolog Bit Score 565.0
Other Homologs: t_PA3907 (ORF: GLIMMER)
GC ORF Sequence
ATGAGCGGCATAGGCGCGCTTTTCCGACCGCTGCCCCGCATGGGTCCGCGGCTGCCCTTCGAACTACCCGCG
CCGCCCCGGCCGCACTTGCCGATGCCGGCGCCGCGCCCGCTGCCGCGACCGGCCCCCGGCGCGCTGCCCAGG
CCGGTACCGCGTCCGATGCCGGTTCCGCAGACCCTGCCCAGGACCGAGACCGGCACGCTGAGCCGCGACCGG
ACCCGGGAAGCCGAGCGCGATTGCAGCAAGAGCCAGGGCCGCGACAAGGACTGCGTGGAGTGCCCGCCGTCC
CGGGGCGAAATGGCCATCGCCAATAACGGCAAGGGCCACAGCATGTCGGACCTGTCCGCGCGCTACCAGCAG
TGGGTGACCAATTTCCCGTTTCCCCACGAATGGTTCTGGAGCGGCACCTGGTGGGACGGCTTCGACGAGCCG
CGCTGCACCCTGCTGGAGGCGAAGGCCAACTACGCCTTCCTGTTCGTCCCGCTGCTCGGCGTGCCCAGGCCC
TGGGCGCGGGCCAAGGTGAAGTCGGACCTGCTGCAGAAGGCCGAGGTCCACAGCGACAAGGCCCGACCGATC
CCGCCGGTGTTCGTCGAATGGCACTTCCTGCAGCGGATCGTCTACGAGTACTGCGCCGCGGAGTACCTGCGC
ATGGGACTGGCCAACCTGAAGGCATTCTGGAATCCGATGCCGGGAACGGACGAGCACGACGACTACCAGGAA
ACCCGCGCGAAGGAACAGGAAGAGATGAAAAGGTTTTGCGAAGAGAACCCGGGGTATTGCGCATGA