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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05538.1|AE004642_5 (AE004642) conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 289/293 (98%), Positives = 291/293 (99%)
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Sequence:
ATGGCGCGTGCGATCTGGAAAGGCGCGATCAGCTTCGGCCTGGTGCATATACCGGTGAGCCTGTCGGCGGCG
ACCTCGTCGCAGGGCATCGATTTCGACTGGCTCGACCAGCGCAGCATGGAGCCGGTCGGCTACAAACGGGTG
AACAAGGTCACCGGCAAGGAGATCGAGCGCGAGAACATCGTGAAGGGCGTGGAGTACGAAAAGGGTCGCTAC
GTGGTGCTGAGCGAGGAAGAAATCCGCGCGGCGCATCCCAAGTCGACCCAGACCATCGAGATCTTCGCTTTC
GTCGATAGCCAGGAAATTCCCCTGCAGCACTTCGATACCCCGTACTACCTGGCCCCCGACCGGCGCGGAGGC
AAGGTCTACGCGCTGCTCCGGGAGACCCTGGAGCGCACCGGCAAGGTCGCCCTGGCCAACGTCGTCCTGCAC
ACCCGCCAGCACCTGGCGCTCCTGCGGCCTCTAGAGGACGCCCTGGTGCTGATCACTCTGCGCTGGCCGTCG
CAGGTGCGCAGCCTGGATGGCCTGGAGCTGGAGGAAAGCGTCACCGAGGCGAAACTCGACAAGCGCGAGCTG
GAGATGGCCAAGCGCCTGGTGGAGGACATGGCCTCCCACTGGGCGCCGGACGAATACAAGGACAGCTTCAGC
GACAAGATCATGAAGCTGGTCGAGGAAAAGGCCGCCAAGGGCCAACTGCACGCGGTGGAGGAAGAGGAGGAG
GTGGCCGGCAAGGGCGCCGACATCATCGATCTCACCGACCTGCTCAAGCGCAGCCTGCGTTCCCGCGCCGGC
GGCGGCAAGGACAAGGGTAGCGAAAAGGCCGGGGCCGACGCGAAGGGTCGCGCCAAGTCCGGTGCCTCGCGT
TCGCGGCGCAAGGCCTGA |
Translation:
MARAIWKGAISFGLVHIPVSLSAATSSQGIDFDWLDQRSMEPVGYKRVNKVTGKEIERENIVKGVEYEKGRY
VVLSEEEIRAAHPKSTQTIEIFAFVDSQEIPLQHFDTPYYLAPDRRGGKVYALLRETLERTGKVALANVVLH
TRQHLALLRPLEDALVLITLRWPSQVRSLDGLELEESVTEAKLDKRELEMAKRLVEDMASHWAPDEYKDSFS
DKIMKLVEEKAAKGQLHAVEEEEEVAGKGADIIDLTDLLKRSLRSRAGGGKDKGSEKAGADAKGRAKSGASR
SRRKA* |
AnnotationID:2741 | GeneID:2733 |
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Modification Date/Time: |
2005-03-03 12:12:12 |
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GeneProduct: | putative KU domain protein |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (11) DNA replication, recombination, modification and repair |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO56940.1| (AE016868) KU domain protein [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 299
Score = 373 bits (957), Expect = e-103
Identities = 188/287 (65%), Positives = 232/287 (80%), Gaps = 8/287 (2%)
>emb|CAE33336.1| (BX640445) putative membrane protein [Bordetella bronchiseptica]
Length = 308
Score = 271 bits (692), Expect = 4e-72
Identities = 131/295 (44%), Positives = 195/295 (66%), Gaps = 3/295 (1%) |
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Structural Features: | cd00789, KU_like
CD-Length = 256 residues, 100.0% aligned
Score = 318 bits (816), Expect = 6e-88
Identities = 127/262 (48%), Positives = 168/262 (64%), Gaps = 6/262 (2%)
cd00594, KU
CD-Length = 270 residues, 100.0% aligned
Score = 188 bits (479), Expect = 7e-49
Identities = 97/272 (35%), Positives = 140/272 (51%), Gaps = 20/272 (7%)
pfam02735, Ku, Ku70/Ku80 beta-barrel domain.
CD-Length = 205 residues, 100.0% aligned
Score = 147 bits (372), Expect = 2e-36
Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 19/208 (9%) |
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