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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05039.1|AE004593_1 (AE004593) probable transporter [Pseudomonas aeruginosa PAO1]
Identities = 295/297 (99%), Positives = 296/297 (99%)
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Sequence:
ATGACCGCCGATCCCATCCTGACCCTGTTCCTCCCCATCGCCCTGGGCATCATCATGCTCGGTCTCGGACTG
TCCCTGACCCCGGCCGACTTCCTCCGCGTGGTGCGCTACCCGAAGCCGGTGCTGGTCGGCCTGGTGTGCCAG
ATCGTCCTGCTGCCCCTGGCCTGTTTCCTGATCGTCCAGGGCTTCGCCCTCGAGGCGGCCCTGGCGGTCGGC
ATGATGTTGCTGGCGGCCTCGCCCGGCGGCACCACCGCCAACCTCTACAGCCACCTGGCGCATGGCGACGTG
GCACTGAACATCACCCTGACCGCGGTGAACTCGGTGATCGCCATCCTCACCATGCCGCTGATCGTCAATCTG
TCGCTGCAATACTTCATGGGCGACGGGCAGGCGATTCCCCTGCAGTTCGGCAAGGTCATGCAGGTGTTCGTC
ATCGTCCTCGGCCCGGTGGCCATCGGCATGCTGGTGCGCAACCGCCTGCCGGCCGTGGCGGATCGGCTGCAG
AAGCCGGTGAAGATCCTTTCCGCGCTGCTGTTGCTGGTGATCATCCTGCTGGCGCTGGCCAAGGACTGGCAG
ACCTTCGTCACCTACGCGCCGGTGGTCGGGCTGGCCGCGCTGGCCTTCAACCTGCTGAGCCTGGCGGTGGGC
TACTGGGTACCGCGCCTGCTGCGCCTGCCGAAGGCCCAGGCGGTGGCCATCGGCATGGAGATCGGCATCCAC
AACGGCACCCTGGCGATCGCCCTGGCGCTGAGTCCGAGCCTGCTGAACAACAGCACCATGGCGATTCCGCCG
GCGATCTACGGGGTGTTGATGTTCTTCACCGCGGCGGCCTTCGGCTGGTGGGTCAGCCGTGGCCACCAGGCC
GCGCCGGCGCCCGTGACGGCGCCGGACTGA |
Translation:
MTADPILTLFLPIALGIIMLGLGLSLTPADFLRVVRYPKPVLVGLVCQIVLLPLACFLIVQGFALEAALAVG
MMLLAASPGGTTANLYSHLAHGDVALNITLTAVNSVIAILTMPLIVNLSLQYFMGDGQAIPLQFGKVMQVFV
IVLGPVAIGMLVRNRLPAVADRLQKPVKILSALLLLVIILLALAKDWQTFVTYAPVVGLAALAFNLLSLAVG
YWVPRLLRLPKAQAVAIGMEIGIHNGTLAIALALSPSLLNNSTMAIPPAIYGVLMFFTAAAFGWWVSRGHQA
APAPVTAPD* |
AnnotationID:2728 | GeneID:2720 |
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Modification Date/Time: |
2005-02-27 17:05:54 |
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GeneProduct: | putative transporter, bile acid/Na+ symporter family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane protein |
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Homology: | >gb|AAN68854.1|AE016517_14 (AE016786) transporter, bile acid/Na+ symporter family [Pseudomonas
putida KT2440]
Length = 297
Score = 451 bits (1159), Expect = e-126
Identities = 227/289 (78%), Positives = 255/289 (88%)
>gb|AAN48539.1|AE011314_2 (AE011314) Na(+) dependent transporter,Sodium Bile acid symporter
family [Leptospira interrogans serovar lai str. 56601]
Length = 314
Score = 255 bits (651), Expect = 2e-67
Identities = 130/285 (45%), Positives = 199/285 (69%), Gaps = 3/285 (1%)
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Structural Features: | COG0385, COG0385, Predicted Na+-dependent transporter
CD-Length = 319 residues, 89.7% aligned
Score = 186 bits (475), Expect = 2e-48
Identities = 101/294 (34%), Positives = 161/294 (54%), Gaps = 10/294 (3%)
pfam01758, SBF, Sodium Bile acid symporter family.
CD-Length = 186 residues, 95.2% aligned
Score = 78.3 bits (193), Expect = 9e-16
Identities = 53/179 (29%), Positives = 96/179 (53%), Gaps = 4/179 (2%) |
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