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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05797.1|AE004668_7 (AE004668) probable permease of ABC transporter [Pseudomonas aeruginosa PAO1]
Identities = 301/301 (100%), Positives = 301/301 (100%)
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Sequence:
ATGAACGACGCCTACGAACAACTGCGCCAGGCCGTCCAGGCCTGGGCCGCCGCCGGCTACCTGCCGGAGACC
CTGGCCTACGGCTTCGTCGTCAACGCGCTCCTCGCCGGCCTGCTGATCGGCCCGGTGCTCGGCGGCCTCGGC
ACCCTGGTGGTGGTCAAGCGCTTCGCCTTCTTCTCCGAGGCGGTCGGCCACGCCGCGCTCACCGGCGTGGCC
ATCGGCATCCTCCTCGGCGAGCCCTACACCGGGCCCTACGGCAGCCTGTTCGGCTACTGCCTGCTGTTCGGC
GTCCTGCTCAACTACCTGCGCAACCGCACCGGCCTGGCCCCGGACACCCTGATCGGGGTGTTCCTCTCGGTG
TCCCTGGCGCTCGGCGCCAGCCTGCTGCTGGTGCTGGCGGGCAAGATCAACGTGCATATCCTCGAGAACGTG
CTGTTCGGCTCGGTGCTGACCGTGAACGGCCATGACCTCGCGGTGCTGGCGGCGGTCGCCGTGCTGGTGCCG
TGCCTGGCCCTGCCGCTGTACAACCGCATCATGCTGGCCAGCTTCAACCCGCAACTGGCGGCGGTGCGCGGG
GTCGCGGTGAAGAGCCTGGACTACCTGTTCGTGGCCCTGGTGACCCTGGTCACCGTCGCCGCGGTGAAAGTG
ATCGGCGCGATCCTGGTCGGTGCCCTGCTGGTGATCCCGGCGGCGGCGGCGCGCCTGGTTAGCCAGTCGCTG
AAAGGGTTCTTCTGGCTGGCGGTGCTGATCGCCACCGTCAGCACGCTGGCCGGTATCCTGCTGCCGATCATG
TTCGACCTGCCGATTCCCTCCGGCGCCGCGATCATCCTGGTCGCCGGCCTGGCCTTCGGCCTCGCCGCCATC
GCTCGCGGCTGCCTGCCGCACCTGAAAGGAACCCCCGGATGA |
Translation:
MNDAYEQLRQAVQAWAAAGYLPETLAYGFVVNALLAGLLIGPVLGGLGTLVVVKRFAFFSEAVGHAALTGVA
IGILLGEPYTGPYGSLFGYCLLFGVLLNYLRNRTGLAPDTLIGVFLSVSLALGASLLLVLAGKINVHILENV
LFGSVLTVNGHDLAVLAAVAVLVPCLALPLYNRIMLASFNPQLAAVRGVAVKSLDYLFVALVTLVTVAAVKV
IGAILVGALLVIPAAAARLVSQSLKGFFWLAVLIATVSTLAGILLPIMFDLPIPSGAAIILVAGLAFGLAAI
ARGCLPHLKGTPG* |
AnnotationID:2703 | GeneID:2695 |
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Modification Date/Time: |
2005-03-06 10:10:57 |
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GeneProduct: | putative permease of ABC transporter |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (27) Transport of small molecules |
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Alternate Gene Product Name: | putative ABC-type Mn2+/Zn2+ transport systems, permease components |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | membrane proteins |
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Homology: | >gb|AAN69397.1|AE016576_7 (AE016788) cation ABC transporter, permease protein, putative
[Pseudomonas putida KT2440]
Length = 299
Score = 493 bits (1269), Expect = e-139
Identities = 258/297 (86%), Positives = 276/297 (92%)
>gb|AAO55656.1| (AE016863) cation ABC transporter, permease protein [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 299
Score = 489 bits (1260), Expect = e-138
Identities = 258/297 (86%), Positives = 274/297 (92%)
>gb|AAL93909.1| (AE010483) Manganese transport system membrane protein mntB
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
Length = 297
Score = 326 bits (835), Expect = 1e-88
Identities = 154/285 (54%), Positives = 221/285 (77%) |
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Structural Features: | COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components
[Inorganic ion transport and metabolism]
CD-Length = 274 residues, 98.5% aligned
Score = 150 bits (380), Expect = 3e-37
Identities = 117/277 (42%), Positives = 164/277 (59%), Gaps = 7/277 (2%)
pfam00950, ABC-3, ABC 3 transport family
CD-Length = 258 residues, 99.6% aligned
Score = 129 bits (327), Expect = 3e-31
Identities = 97/264 (36%), Positives = 151/264 (57%), Gaps = 7/264 (2%)
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