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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05664.1|AE004653_7 (AE004653) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 292/296 (98%), Positives = 293/296 (98%)
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Sequence:
ATGAGCACTACTTCCACCGACATGGCGTCGCTGATCACCACCCTGCAAGGCGAACCGGGTTTCGACGCCACC
CGCATCCCCGGCGTCCGCCTGATGCGCGCCGAACAGGCCTATCCGCGCAGCCCGGTGTTCTACGAGCCGCGC
ATCTGCATCCTCGCCCAGGGCCAGAAGATCGGTTTCCTCGGTGGCGAAACCTACCGCTATGACGCCGAACGC
TACCTGGTGATGTCGGTGCCCCTGCCGTTCGAATGCGAAACCCACGCCTCCGCCGCCGAGCCCTTGCTGGGA
GTGAGCGTCGACGTGGAAATCGGCACCTTGAAGGAACTGCTGCTACAGATGGAAGAGGCTCCCGGCAGCGAC
GACGACAACGAACTGGCGCCCAGCGCGCCGATGGCTTCGGTACCGCTGGACGCGGGGATGGCCGATGCGGTG
ATGCGCCTGCTGCGCTGCCTGCAGAGCCCGCTGGACAGCCATATCCTCGGCCCGCAACTGGTCCGCGAGATC
ATCTTCCGCGCCCTGCGCAGCGAGCAGGGCAACGCCCTGCGTGCGGTGGCCGGCCGGCACAGCGGCTACGGG
CGCATGGCCAGGGCCCTGCGGCGCATCCACACCGACTACGCCAGTGCGCTGGACATCGACACCCTGGCTCGC
GAGGCGAACATGAGCGTGTCGACCTTCCACCACAACTTCAAGGCGATGACCTTCACCTCGCCCCTCCAGTAC
CTGAAGAGCGTGCGCCTGTACAAGGCCTGGAGCCTGATGGTGCAGGACGGGCTGAACGCCAGTACCGCCGCC
AACCAGGTCGGCTACGAGAGCCCCTCGCAGTTCAGCCGCGAGTTCAAGCGCTACTTCGGGCGCACGCCGAGC
GAGGAAGTCCAGGCCGCCCGCCGCTAG |
Translation:
MSTTSTDMASLITTLQGEPGFDATRIPGVRLMRAEQAYPRSPVFYEPRICILAQGQKIGFLGGETYRYDAER
YLVMSVPLPFECETHASAAEPLLGVSVDVEIGTLKELLLQMEEAPGSDDDNELAPSAPMASVPLDAGMADAV
MRLLRCLQSPLDSHILGPQLVREIIFRALRSEQGNALRAVAGRHSGYGRMARALRRIHTDYASALDIDTLAR
EANMSVSTFHHNFKAMTFTSPLQYLKSVRLYKAWSLMVQDGLNASTAANQVGYESPSQFSREFKRYFGRTPS
EEVQAARR* |
AnnotationID:2684 | GeneID:2676 |
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Modification Date/Time: |
2005-03-04 09:09:11 |
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GeneProduct: | putative transcriptional regulator, AraC family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAM87046.1|AE013953_2 (AE013953) putative AraC-type regulatory protein [Yersinia pestis
KIM]
Length = 297
Score = 261 bits (668), Expect = 3e-69
Identities = 138/290 (47%), Positives = 187/290 (64%), Gaps = 7/290 (2%)
>gb|AAL22037.1| (AE008845) putative AraC/XylS family transcriptional regulator
[Salmonella typhimurium LT2]
Length = 305
Score = 254 bits (649), Expect = 4e-67
Identities = 134/289 (46%), Positives = 188/289 (65%), Gaps = 5/289 (1%)
>gb|AAP18345.1| (AE016988) putative ARAC-type regulatory protein [Shigella flexneri
2a str. 2457T]
Length = 375
Score = 248 bits (634), Expect = 2e-65
Identities = 132/291 (45%), Positives = 184/291 (63%), Gaps = 9/291 (3%)
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Structural Features: | pfam06719, AraC_N, AraC-type transcriptional regulator N-terminus.
CD-Length = 156 residues, 100.0% aligned
Score = 187 bits (477), Expect = 1e-48
Identities = 75/159 (47%), Positives = 98/159 (61%), Gaps = 4/159 (2%)
COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]
CD-Length = 127 residues, 97.6% aligned
Score = 96.9 bits (240), Expect = 2e-21
Identities = 50/124 (40%), Positives = 64/124 (51%)
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