|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG06821.1|AE004764_7 (AE004764) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 295/297 (99%), Positives = 296/297 (99%)
|
Sequence:
ATGGAATTCCGTCAACTCCGCAGCTTCGTCGAAGTGGTCCGCCAGGGCAGCTTCACCCAGGCGGCTCAGGTC
CGCCACGCCAGCCAGTCGACCATCAGCAAGCAGGTCGCCCAACTGGAGCAGAGCCTTGGCGTGCAGGTATTG
GAACGCAACGGGCCGCACGTGCGCCTGACCGACGCCGGCGCCGTGGTGTTTCGCCGCGCCGAGGAGATGCTG
CGGCTGCGCCGCGACCTGCTCAGCGAACTGGACGACCTCAGCCAACTCAACCGCGGCGAACTGCGCCTGGGC
CTGCCATTGCTCGGTGCCGACGCGCTGTTCGCCCAACGCTTCGCCGAATACCGGCGGCGCTATCCGAACATC
GCCGTGCACCTGGTGGAAGGCGGCAGCAAGACCATGGAGCAGGCGGTGCTGGCCGGCGAGCTGGAACTGGCC
GGCAGCCTCACCCCGGCGGACGACGGCTTCGACTACCAGCCGTTCTGCAACGAACCGCTGGACGTGCTGCTG
CCGGCCGGGCATCCCAAGGCCGCTGCCGCCAGCGTCGCCCTCGGCGAACTGGCGGACAGCCCGTTCCTGCTC
TACCAGCAGAGCTTCACCCTCAACGACCGCCTGCTGCGCGCCTGCCTGGATGCCGGCTTCAGCCCGCGCGAA
GGCGGCCGCAGCGGCCAGGCCGACTTCCTCGGCGCGCTGGTGGCGGCCAACCAGGGGGTGGTGCTGCTACCG
CGGGCGATCGCTCGCGAGATCGAACGCCCGGGAGTGGTGCGGGTCCTGCTCAGGGAGCCGGACCTGCGCTGG
GACATCGCCTTCATCTGGCGCCGGGGCGGCTACCTGTCGCGGGCGGCGCAGGCCTGGCTGGAGCTGCTGCGC
GAGCAGCCGCTGGAGGAAAGCCCGGCGTAA |
Translation:
MEFRQLRSFVEVVRQGSFTQAAQVRHASQSTISKQVAQLEQSLGVQVLERNGPHVRLTDAGAVVFRRAEEML
RLRRDLLSELDDLSQLNRGELRLGLPLLGADALFAQRFAEYRRRYPNIAVHLVEGGSKTMEQAVLAGELELA
GSLTPADDGFDYQPFCNEPLDVLLPAGHPKAAAASVALGELADSPFLLYQQSFTLNDRLLRACLDAGFSPRE
GGRSGQADFLGALVAANQGVVLLPRAIAREIERPGVVRVLLREPDLRWDIAFIWRRGGYLSRAAQAWLELLR
EQPLEESPA* |
AnnotationID:2674 | GeneID:2666 |
|
Modification Date/Time: |
2005-04-18 17:05:57 |
|
|
|
GeneProduct: | putative transcriptional regulator, LysR family |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (25) Transcriptional regulators |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | |
|
|
|
|
Homology: | >gb|AAN70200.1|AE016659_6 (AE016791) transcriptional regulator, LysR family [Pseudomonas
putida KT2440]
Length = 293
Score = 410 bits (1054), Expect = e-114
Identities = 204/290 (70%), Positives = 238/290 (82%), Gaps = 1/290 (0%)
>gb|AAN54119.1|AE015549_5 (AE015549) transcriptional regulator, LysR family [Shewanella
oneidensis MR-1]
Length = 296
Score = 219 bits (557), Expect = 2e-56
Identities = 120/291 (41%), Positives = 180/291 (61%), Gaps = 2/291 (0%) |
|
Structural Features: | pfam03466, LysR_substrate, LysR substrate binding domain.
CD-Length = 209 residues, 99.0% aligned
Score = 128 bits (323), Expect = 8e-31
Identities = 78/207 (37%), Positives = 110/207 (53%), Gaps = 2/207 (0%)
COG0583, LysR, Transcriptional regulator [Transcription]
CD-Length = 297 residues, 100.0% aligned
Score = 134 bits (337), Expect = 1e-32
Identities = 108/301 (35%), Positives = 157/301 (52%), Gaps = 8/301 (2%)
|
|
|
|
|
|