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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05885.1|AE004677_2 (AE004677) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 292/292 (100%), Positives = 292/292 (100%)
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Sequence:
ATGCTCGATCTGGTCCTGCTCCGTACCTTCGTCAGCGTTGTCGACACCGGCAACTTCACCCGCGCCGGCGAA
CACCTGCACCTGACCCAGTCCACCGTCAGCCAGCAGGTCATCCGCCTCGAACAGAACCTCGGTTGCCGCCTG
CTCGACCGCAGCCAGCGGCAGGTCTTGCCGACCGAGGAAGGCGAGCGCCTGCTTGGCTACGCGCGGCGCCTG
CTGCGGCTCTCGGACGAGGCCAGCGAGGCCCTCAGCCCGGCCCATGGCGACGGCGTGCTGCGCCTCGGCGTG
CCGGAAGACCTCGCCGGCGAAGTGCTGATGCCGGTGCTGACGCGCTTCACCGAAGAGCGTCCGCGACTGCGC
CTGGAGGTCGAGAGCGGTCTCAGCCATCACCTGCTGCGCCTCTATCGCAGCGGCGAGCTGGACCTGCTGCTG
GTCAAGCAGTGGGGGGCCGACAGCGACTGCCATGCGCGCTGGGCCGAGCCGCTGGGCTGGTTCGGCAGCGCC
GCGCGGCCGTTCGGCGAGGGTTCGCCGGAGGAGCCGGTGCCGCTGGTGGTGTTCCCGGTCGGCGCGCTGTAT
CGCCAGGAGATGATCCATGCCCTGGAGAGCATCGGGCGTCGCTGGCGCATCGGCTATTCCAGCGCCAGCCTG
GCCAGCCTGGTGGCCGCGGTCGGCGCCGGACTGGGGGTCAGCCTGCTGCCGCTGGGCTGCGTCGGGCCCGAG
CATCGCCTGCTTGGCGCGCAGGCCGGCTTCCCGCCCATCGCTGGCCTGGAGCTGGCGCTCTACGCGCGGCCC
GAGCTGGACAGCGCCGGGCGCACCCTCCGCGACCGCCTGCGCGACCTCTGCGATGCACGCCTGGAAGGGTTG
CAGGGCGAGCGCTGA |
Translation:
MLDLVLLRTFVSVVDTGNFTRAGEHLHLTQSTVSQQVIRLEQNLGCRLLDRSQRQVLPTEEGERLLGYARRL
LRLSDEASEALSPAHGDGVLRLGVPEDLAGEVLMPVLTRFTEERPRLRLEVESGLSHHLLRLYRSGELDLLL
VKQWGADSDCHARWAEPLGWFGSAARPFGEGSPEEPVPLVVFPVGALYRQEMIHALESIGRRWRIGYSSASL
ASLVAAVGAGLGVSLLPLGCVGPEHRLLGAQAGFPPIAGLELALYARPELDSAGRTLRDRLRDLCDARLEGL
QGER* |
AnnotationID:2650 | GeneID:2642 |
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Modification Date/Time: |
2005-03-06 15:03:57 |
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GeneProduct: | putative lysR-family transcriptional regulator |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >emb|CAE31658.1| (BX640440) putative lysR-family transcriptional regulator
[Bordetella bronchiseptica]
Length = 293
Score = 351 bits (900), Expect = 3e-96
Identities = 188/284 (66%), Positives = 206/284 (72%), Gaps = 2/284 (0%)
>emb|CAE40358.1| (BX640425) putative lysR-family transcriptional regulator
[Bordetella parapertussis]
Length = 293
Score = 351 bits (900), Expect = 3e-96
Identities = 188/284 (66%), Positives = 206/284 (72%), Gaps = 2/284 (0%)
>gb|AAN69135.1|AE016547_3 (AE016787) transcriptional regulator, LysR family [Pseudomonas
putida KT2440]
Length = 293
Score = 230 bits (586), Expect = 8e-60
Identities = 129/280 (46%), Positives = 172/280 (61%), Gaps = 3/280 (1%)
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Structural Features: | COG0583, LysR, Transcriptional regulator [Transcription]
CD-Length = 297 residues, 99.7% aligned
Score = 130 bits (328), Expect = 1e-31
Identities = 104/298 (34%), Positives = 142/298 (47%), Gaps = 15/298 (5%) |
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