ViewGene

Locus Name:
GeneID:
Location:

GeneID:2615
TrivialName: PA14_24810
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_24810
PAO1 Ortholog Locus:PA3037
Sequence Length:867
Protein Length:288
Start: 2169708
Stop: 2168842
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG06425.1|AE004728_11 (AE004728) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 286/288 (99%), Positives = 288/288 (100%)
Sequence:
ATGCCTTTCCTGTATCGCCTTGCCTCGTTGTTGATCGCCCTCCTCGTCCTGCCGGTGCAGGCGGCGGAAATG
CGAGTCGCCCTGTTGCGCACCTCGGGAGTGGAAACCCTCGATGCGCTCACCGTCGACGGCGGCTCCTGGGTG
CGCCGGGTGCCGCTCAGCCATACCGCGGTGCTGATCGAGCACCATGCCGCCACCCTGCTCTTCGACACTGGC
CTGGGGCGCGACATCGACGCCCAGTTCCGCGCCGACATGCCCTGGTGGGCGGCGCCGCTGTTCGCTTACCAG
AAAGTCGTCCCGGCGCGCGACCAACTGGACGCAGCCGGTATCCGCGTCGATCGCATCCTGCTGTCCCACGCA
CACTGGGATCACGCCTCGGGCCTGGTCGACTTCCCCGAAGTACCGGTCTGGGCACCCTACGAGGAGATCGCC
TTCAGCCGCATCGCCACCCCGCCGGCCGCCTTCCCCAGCCAATTCCGCCATGGCGTGCGCTGGCGACCTTAC
AGCTTCGATCCGCAGCCGTTCATGGGCTTCGACGAAAGCCTCGACCTGTTTGGCGACGGCCGCCTGGTGCTG
GTCCCCCTGCCCGGCCATACGCCCGGCTCAGTCGGTCTGTTCGTCACCCTCGACAGCGGGCGCCGGCTGTTC
TTCAGCGGCGACACCAGTTGGCGACTCGAAGGCGTCGAAGGCCCACGGCAGAAATTCTTCGCCGGCCGCGCC
CTGGTCGATCGCGATCCCGCGCGCACCCTCGCGCAACTGGCGAAGATCCGCCTGCTGCTCCGCAGCGACCCG
CGCCTGAGCGTGATTCCGGCGCACGATGCGCGGGTCCAGGCCGCCCTGGGCTACTTCCCGCACTGGCTGGAA
TAG
Translation:
MPFLYRLASLLIALLVLPVQAAEMRVALLRTSGVETLDALTVDGGSWVRRVPLSHTAVLIEHHAATLLFDTG
LGRDIDAQFRADMPWWAAPLFAYQKVVPARDQLDAAGIRVDRILLSHAHWDHASGLVDFPEVPVWAPYEEIA
FSRIATPPAAFPSQFRHGVRWRPYSFDPQPFMGFDESLDLFGDGRLVLVPLPGHTPGSVGLFVTLDSGRRLF
FSGDTSWRLEGVEGPRQKFFAGRALVDRDPARTLAQLAKIRLLLRSDPRLSVIPAHDARVQAALGYFPHWLE
*
AnnotationID:2623GeneID:2615
AnnotatorUID: diggins
Modification Date/Time: 2005-04-12 06:06:22
Gene Name:
Confidence Code:3
GeneProduct:putative hydrolase
Cell Localization:()
Synonyms:PA3037
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(20) Putative enzymes
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
Genomic Context:
Comment:
ReferenceID:5233
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:22378
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
ReferenceID:36013
Author/Investigator(s):
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:Misc (text/plain)
Data:2615_cdd.html
URL:
Homologs By Global Alignment
Gene ID:2615

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
4324 PA3037_tr translation of PA3037 288 99.30 99.99 0 1505.0
126886 gb|AAG06425.1|AE004728_11 (AE004728) hypothetical protein PA3037 [Pseudomonas aeruginosa PAO1] 288 99.30 99.99 0 1505.0
GC ORFID: 45617How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA3037Glimmer Score:
Start: 2784220Stop: 2785086
Length: 867
Start Codon: ATGTruncated Start:
Stop Codon: TAGTruncated Stop:
Homolog: t_PA3037 translation of PA3037Homolog Bit Score 584.0
Other Homologs: t_PA3037 (ORF: GLIMMER)
GC ORF Sequence
ATGCCTTTCCTGTATCGCCTTGCCTCGTTGTTGATCGCCCTCCTCGTCCTGCCGGTGCAGGCGGCGGAAATG
CGAGTCGCCCTGTTGCGCACCTCGGGAGTGGAAACCCTCGATGCGCTCACCGTCGACGGCGGCTCCTGGGTG
CGCCGGGTGCCGCTCAGCCATACCGCGGTGCTGATCGAGCACCATGCCGCCACCCTGCTCTTCGACACTGGC
CTGGGGCGCGACATCGACGCCCAGTTCCGCGCCGACATGCCCTGGTGGGCGGCGCCGCTGTTCGCTTACCAG
AAAGTCGTCCCGGCGCGCGACCAACTGGACGCAGCCGGTATCCGCGTCGATCGCATCCTGCTGTCCCACGCA
CACTGGGATCACGCCTCGGGCCTGGTCGACTTCCCCGAAGTACCGGTCTGGGCACCCTACGAGGAGATCGCC
TTCAGCCGCATCGCCACCCCGCCGGCCGCCTTCCCCAGCCAATTCCGCCATGGCGTGCGCTGGCGACCTTAC
AGCTTCGATCCGCAGCCGTTCATGGGCTTCGACGAAAGCCTCGACCTGTTTGGCGACGGCCGCCTGGTGCTG
GTCCCCCTGCCCGGCCATACGCCCGGCTCAGTCGGTCTGTTCGTCACCCTCGACAGCGGGCGCCGGCTGTTC
TTCAGCGGCGACACCAGTTGGCGACTCGAAGGCGTCGAAGGCCCACGGCAGAAATTCTTCGCCGGCCGCGCC
CTGGTCGATCGCGATCCCGCGCGCACCCTCGCGCAACTGGCGAAGATCCGCCTGCTGCTCCGCAGCGACCCG
CGCCTGAGCGTGATTCCGGCGCACGATGCGCGGGTCCAGGCCGCCCTGGGCTACTTCCCGCACTGGCTGGAA
TAG