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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG06267.1|AE004714_4 (AE004714) probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
Identities = 295/296 (99%), Positives = 295/296 (99%)
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Sequence:
ATGCATTTGTCGCCCGAATCCCTCGAGGCCTTCGTCCAGGCCGTTTCCCTCGGCTCCTTCAGCGCCGCCGCG
CGCAAGCTGGGCAAGAGCCAGTCGACCGTCAGCGAGGCCATTGCCCGGCTGGAGATCGACCTCGGCCTGGAA
CTCTTCGACCGCAGTGGCCGCCAGCCGCAACTGACCGAGGCCGGGCGCACGCTGCTGGGACGGGTCGAGGAG
GTCCTCGGTGCATCCGACCGCCTGCGCCGGGTCGCCGCGCTGCTCGCCGGCGGCTCGGAGCCACGGGTGACC
CTGGCGCTATCCGACACCTACCATTCGGCGCGCTACGAGGCGCGCCTGGCCGAACTGGACGAGCGTTACCCT
GAGCTGGAGTTCGAATGCCTGATCGCCGAGGACCAGGACGTGATCGCCCAGGTCAGCCGCGGCCGCGTCACC
CTCGGCCTGCTCGCCGCGCAGCCGCACTACCCGCCGGAGCTGGGCGTGGCGGCGGTCGCCGAGCGTGCCGAG
TTCGGCCTGTTCGCCGCCGTCGACCATCCGCTGGCGGGCCTGGAGCGGGTCAGCGAGCGCGACCTTTCCGAA
TGGCGTCTGCTGCGCCTGAACACCTATAGCGAGACCGGCGCGGCGATCAACGACGGCCTGCCGTCCAGCGGC
GGGCGCTGCTGGTCGGCGCCCAACTACCTGTTGCTGCTGGAAATGGCCACCCACGGCTTCGGTTGGGCCGAG
CTGCCGCGCTGGCTGGTCAGCGGCTACGCCAACGGGCGGCTAAAGGAGTTGCCGGTGTCCGGCTGGCCGCGC
AGCCAGGCGGTGGATGTGGTCTGGTCGCGGCAGCGGCCGTTGGGACCGGCGGCCAACTGGTTGCTGGACCGC
TTGCTGGATCGCGACCTGCCTATCTAG |
Translation:
MHLSPESLEAFVQAVSLGSFSAAARKLGKSQSTVSEAIARLEIDLGLELFDRSGRQPQLTEAGRTLLGRVEE
VLGASDRLRRVAALLAGGSEPRVTLALSDTYHSARYEARLAELDERYPELEFECLIAEDQDVIAQVSRGRVT
LGLLAAQPHYPPELGVAAVAERAEFGLFAAVDHPLAGLERVSERDLSEWRLLRLNTYSETGAAINDGLPSSG
GRCWSAPNYLLLLEMATHGFGWAELPRWLVSGYANGRLKELPVSGWPRSQAVDVVWSRQRPLGPAANWLLDR
LLDRDLPI* |
AnnotationID:2621 | GeneID:2613 |
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Modification Date/Time: |
2005-04-07 08:08:14 |
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GeneProduct: | putative transcriptional regulator, LysR family |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (25) Transcriptional regulators |
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Alternate Gene Product Name: | putative DNA binding protein HpkR |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAO57060.1| (AE016868) transcriptional regulator, LysR family [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 294
Score = 358 bits (918), Expect = 3e-98
Identities = 183/290 (63%), Positives = 220/290 (75%), Gaps = 1/290 (0%)
>gb|AAC61657.1| (AF001355) DNA binding protein HpkR [Pseudomonas syringae pv.
syringae]
Length = 357
Score = 340 bits (872), Expect = 6e-93
Identities = 176/273 (64%), Positives = 206/273 (75%), Gaps = 1/273 (0%)
>emb|CAD18665.1| (AL646085) PUTATIVE TRANSCRIPTION REGULATOR PROTEIN [Ralstonia
solanacearum]
Length = 294
Score = 310 bits (794), Expect = 7e-84
Identities = 162/292 (55%), Positives = 198/292 (67%), Gaps = 2/292 (0%)
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Structural Features: | COG0583, LysR, Transcriptional regulator [Transcription]
CD-Length = 297 residues, 97.6% aligned
Score = 120 bits (302), Expect = 2e-28
Identities = 89/290 (30%), Positives = 121/290 (41%), Gaps = 6/290 (2%) |
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