ViewGene

Locus Name:
GeneID:
Location:

GeneID:2535
TrivialName: PA14_36250
AnnotatorUID:
Modification Date/Time:2006-04-06 13:01:23
LocusName:PA14_36250
PAO1 Ortholog Locus:PA2201
Sequence Length:885
Protein Length:294
Start: 3228482
Stop: 3227598
Strand: -
Type:
ChromosomeID:2
Status: ACTIVE
Frame Discrepancy: FALSE
Missense Discrepancy:FALSE
Comments:
Homology: gb|AAG05589.1|AE004646_10 (AE004646) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 292/294 (99%), Positives = 293/294 (99%)
Sequence:
ATGCACGCATTCCCCCTCACCCTGGACAACCGACTCGCCGACGCCCTGCCGCTATGGCGCAACCTGGCCCGC
ACCGACCGGGCGCCGCGAAGGAACATCGACCTCGCCGACTGGAAAGCCGACTGGCGCGAACTGATCGCCGCG
CTCGACAGGTTTTCCCGGAGCCACGGCTATCGCCAGCCGTTCACCGCGCAAGGGCACGCAGCCCTGGAAAAC
GCCTGGGCCTGGGGCCAGGCCGCGGAAAACGCCAGTACGCTGCTGCTCAAGGCCATCGACCGGGGCCTGGCC
GGCGCCGAACTGCGTTCCATCTACCTGGAGACCGCCGCGCTGTGGCTGGACTACAGCCGGCTGCTCGGCGCC
GCCCGCGACAGCCTGCGCGAGCAGGGCGAGGTCGACTTCGAGACGGCGCCGGCCCTGGCGCCGCGCACCGGC
CAGTACCCGTTCGCGCTGCAACTGCTCGCCATGGGCGTGCTGCTCGACGCCCAGGAGCTAATCCCGGCGCTG
GTCGAGGAGGTCCTGCAGTTCGATACCGACCGCCTGCTCGACTATCTCGGCGCGGCCGCCCTCGGCCTGACT
TCCGCCAGCGAGGAAACCTTCCATCCACGGCCGTTCGGGCAGTTGCGGGCGTTCTTCGAAGAGGCGGACGGC
AGCGACGCCCAGGCGCTGGCGCCTTACCTGCAAAGCCAGTACCGGGAGTTCTTCCAGCTTTCCCCCAAGGCG
CAGAAGAAGACCCGCCGCCTGACCGGCCCCTACGCCTGGGGCTGGTGGGCCATGGAGGTGTCGGCGCTGGGC
GTGCTCTACGGCTGGGACGATGGCGTCCTGCGCGCCTCGCCGCATTACCTCGGCGACCTGGTCGACTACGCG
CGGGCGCGCGGCGACGCCTGA
Translation:
MHAFPLTLDNRLADALPLWRNLARTDRAPRRNIDLADWKADWRELIAALDRFSRSHGYRQPFTAQGHAALEN
AWAWGQAAENASTLLLKAIDRGLAGAELRSIYLETAALWLDYSRLLGAARDSLREQGEVDFETAPALAPRTG
QYPFALQLLAMGVLLDAQELIPALVEEVLQFDTDRLLDYLGAAALGLTSASEETFHPRPFGQLRAFFEEADG
SDAQALAPYLQSQYREFFQLSPKAQKKTRRLTGPYAWGWWAMEVSALGVLYGWDDGVLRASPHYLGDLVDYA
RARGDA*
AnnotationID:2543GeneID:2535
AnnotatorUID: diggins
Modification Date/Time: 2005-03-03 13:01:28
Gene Name:
Confidence Code:4
GeneProduct:hypothetical protein
Cell Localization:()
Synonyms:PA2201
Cell Localization Confidence Code:5
MolecularFunction:
Functional Category:(14) Hypothetical, unclassified, unknown
Alternate Gene Product Name:
Functional Category Confidence Code:5
COGs:
Secondary Functional Category(ies):
EC Number:
Status:ACTIVE
Pathway:
Homology:
Structural Features:
CDD Search: No hits at any threshold.
Genomic Context:
Comment:
ReferenceID:5073
Author/Investigator(s): GenNotator
Title:
PubMed:
MedLine:
Source:
Reference Type:BLASTP
Data:
URL:
ReferenceID:22218
Author/Investigator(s): GenNotator
Title: CDD Search
PubMed:
MedLine:
Source:
Reference Type:RPSBLAST
Data:
URL:
Homologs By Global Alignment
Gene ID:2535

Identity:

0% 10% 20% 30% 40% 50% 60% 70% 80% 90% 100%
HomologID Accession Description Length PctIdentity PctSimilarity Gaps Score
4226 PA2201_tr translation of PA2201 294 99.31 99.65 0 1526.0
124643 gb|AAG05589.1|AE004646_10 (AE004646) hypothetical protein PA2201 [Pseudomonas aeruginosa PAO1] 294 99.31 99.65 0 1526.0
GC ORFID: 45537How Found: BLASTX
GC_TrimmedSeqID: 69Blast Result ID
Subject Sequence Name: t_PA2201Glimmer Score:
Start: 1725434Stop: 1726318
Length: 885
Start Codon: ATGTruncated Start:
Stop Codon: TGATruncated Stop:
Homolog: t_PA2201 translation of PA2201Homolog Bit Score 592.0
Other Homologs: t_PA2201 (ORF: GLIMMER)
GC ORF Sequence
ATGCACGCATTCCCCCTCACCCTGGACAACCGACTCGCCGACGCCCTGCCGCTATGGCGCAACCTGGCCCGC
ACCGACCGGGCGCCGCGAAGGAACATCGACCTCGCCGACTGGAAAGCCGACTGGCGCGAACTGATCGCCGCG
CTCGACAGGTTTTCCCGGAGCCACGGCTATCGCCAGCCGTTCACCGCGCAAGGGCACGCAGCCCTGGAAAAC
GCCTGGGCCTGGGGCCAGGCCGCGGAAAACGCCAGTACGCTGCTGCTCAAGGCCATCGACCGGGGCCTGGCC
GGCGCCGAACTGCGTTCCATCTACCTGGAGACCGCCGCGCTGTGGCTGGACTACAGCCGGCTGCTCGGCGCC
GCCCGCGACAGCCTGCGCGAGCAGGGCGAGGTCGACTTCGAGACGGCGCCGGCCCTGGCGCCGCGCACCGGC
CAGTACCCGTTCGCGCTGCAACTGCTCGCCATGGGCGTGCTGCTCGACGCCCAGGAGCTAATCCCGGCGCTG
GTCGAGGAGGTCCTGCAGTTCGATACCGACCGCCTGCTCGACTATCTCGGCGCGGCCGCCCTCGGCCTGACT
TCCGCCAGCGAGGAAACCTTCCATCCACGGCCGTTCGGGCAGTTGCGGGCGTTCTTCGAAGAGGCGGACGGC
AGCGACGCCCAGGCGCTGGCGCCTTACCTGCAAAGCCAGTACCGGGAGTTCTTCCAGCTTTCCCCCAAGGCG
CAGAAGAAGACCCGCCGCCTGACCGGCCCCTACGCCTGGGGCTGGTGGGCCATGGAGGTGTCGGCGCTGGGC
GTGCTCTACGGCTGGGACGATGGCGTCCTGCGCGCCTCGCCGCATTACCTCGGCGACCTGGTCGACTACGCG
CGGGCGCGCGGCGACGCCTGA