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Modification Date/Time: | 2006-04-06 13:01:23 |
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Missense Discrepancy: | FALSE |
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Comments: Homology: gb|AAG05431.1|AE004630_8 (AE004630) hypothetical protein [Pseudomonas aeruginosa PAO1]
Identities = 292/300 (97%), Positives = 293/300 (97%)
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Sequence:
ATGTCGTCTCCTTCCTTGCCCGACGCCAGTCTCCGCGCCAGCACCCTGCATCTGCCGGCCGGCCCCTGGAGC
ACCGTGCTCGATTGTCTCTGCGCGCGTTTCCCGGCCATCGACCGCGATACCTGGCTGGCGCGCATGCAGCGG
GGCCGGGTGCTGGACGCCGAGGGGCGTGCGCTGGGCCCGCAGGCGGCGTATCGCGAAGGCCTGCGTGTGCAC
TACTTCCGCGAGTTGCCGGCGGAGGCGCCGATCCCTTTCGAGGCGCGCATCCTGTACCGCGACGAGCATCTG
CTGGTGGCGGACAAGCCGCACTTCCTGCCGGTGATGCCGGCCGGCGGCTATGTCGAGCAGACGCTCCTGGCG
CGGCTGGCCCGCAGCACCGGCAATCGCGACCTGGTGCCGCTGCATCGGATCGACCGGCATACCGCCGGGCTG
GTGCTGTTCTCGACCAATCCCGGCAGCCGCGGGCGCTACCAGGCGCTGTTCCGCGAGCGGCGCATCGACAAG
TACTACGAAGCGATCGCTCCGGCCTTGCCGCGACTGGACTTCCCGTTGCTGCGCAGGACCCGCCTGGTGCCC
GGCGAGCCGTTCTTCCGCATGCGCGAAGGCGAGGGCGAGCCGAACAGCGAGACGCGCATCGAGGTCGCCGAG
CGCAACGGCCGCTGGTGGCGCTACCGGCTGTATCCGGTGACCGGCAAGAAGCACCAGCTGCGCGTGCACCTC
GCGGCACTCGGCGCGGGTATCCAGAACGACGGGTTCTATCCCGAGCTGCTGGACGCCGAGGACAGCCCCGAC
GATTACCGGCGGCCGCTCAAGCTGCTGGCCAGGGGGCTGCGCTTCGACGACCCGCTGAGCGGGGAGAGGCGT
ACGTTCGAATCCGGGCTGCGGCTCGATTGGCAGGTGTAG |
Translation:
MSSPSLPDASLRASTLHLPAGPWSTVLDCLCARFPAIDRDTWLARMQRGRVLDAEGRALGPQAAYREGLRVH
YFRELPAEAPIPFEARILYRDEHLLVADKPHFLPVMPAGGYVEQTLLARLARSTGNRDLVPLHRIDRHTAGL
VLFSTNPGSRGRYQALFRERRIDKYYEAIAPALPRLDFPLLRRTRLVPGEPFFRMREGEGEPNSETRIEVAE
RNGRWWRYRLYPVTGKKHQLRVHLAALGAGIQNDGFYPELLDAEDSPDDYRRPLKLLARGLRFDDPLSGERR
TFESGLRLDWQV* |
AnnotationID:2513 | GeneID:2505 |
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Modification Date/Time: |
2005-03-03 05:05:58 |
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GeneProduct: | putative pseudouridylate synthase |
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Cell Localization Confidence Code: | 5 |
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Functional Category: | (26) Translation, post-translational modification, degradation |
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Alternate Gene Product Name: | putative ribosomal pseudouridine synthase |
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Functional Category Confidence Code: | 5 |
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Secondary Functional Category(ies): | |
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Homology: | >gb|AAM43405.1| (AE012545) pseudouridylate synthase [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 298
Score = 336 bits (862), Expect = 9e-92
Identities = 174/290 (60%), Positives = 201/290 (69%), Gaps = 2/290 (0%)
>emb|CAB59478.1| (AL939109) putative ribosomal pseudouridine synthase [Streptomyces
coelicolor A3(2)]
Length = 324
Score = 236 bits (602), Expect = 1e-61
Identities = 138/297 (46%), Positives = 168/297 (56%), Gaps = 4/297 (1%)
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Structural Features: | COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific
[Translation, ribosomal structure and biogenesis]
CD-Length = 289 residues, 93.1% aligned
Score = 171 bits (434), Expect = 1e-43
Identities = 85/280 (30%), Positives = 121/280 (43%), Gaps = 19/280 (6%)
pfam00849, PseudoU_synth_2, RNA pseudouridylate synthase.
CD-Length = 151 residues, 100.0% aligned
Score = 104 bits (261), Expect = 1e-23
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 3/151 (1%)
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