|
|
|
Modification Date/Time: | 2006-04-06 13:01:23 |
|
|
|
|
|
|
|
|
|
|
|
|
Missense Discrepancy: | FALSE |
|
Comments: Homology: gb|AAG07091.1|AE004789_11 (AE004789) probable chemotaxis sensor/effector fusion protein [Pseudomonas aeruginosa PAO1]
Identities = 763/769 (99%), Positives = 764/769 (99%)
|
Sequence:
ATGACCCCGGACCAGATGAGAGACGCGTCGCTGCTCGAGCTGTTCCGGCTCGAGGCGGAGGCCCAGACCCAG
GTGCTCAACGCCGGCCTGATGGCGTTGGAGCGCAGCCCGACCCAGGCCGACCAACTGGAAGCCTGCATGCGC
GCCGCGCACTCGCTGAAAGGCGCGGCGCGGATCGTCGGGCTGGACGCCGGCGTGCGCGTGGCGCACGTCATG
GAGGATTGCCTGGTGGAGGCGCAGGACGGACGCCTGCTCCTGCAATCGGAACATATCGATGCGTTGCTCCAG
GGCTGCGACCTGTTGCTGCGTATCGGCACCCCGCCCGCCGGCGACGCAGGCTGGGCCGAAGACGCCGGGCGG
GAAGAGATCGACGGTCTGGTGCAGCGCCTCGAAGGCCTGGTGCGCAGCGGCCTGCCGCTGGCCCGCGCGGAG
CTGCCGGCGACGACTCCCGGCCTGCCGGAAGCGGCCCCCGAGGCGCCGCCAGCGGCGTCAGCGGCCGCCAGC
GACGACAACGACGAGGAGCCCGCCGGGCAGGCGGGCGGCGAACAGGCCGAGGAGCGCCGCAGCCGGGTCCTG
CGGGTCACCGCCGAGCGCCTGGACCGGCTGCTGGATATCTCCAGCAAGTCGCTGGTGGAGTTCCAGCGCATC
AAGCCGCTGGCCGATTCCCTGCAACGCCTGCGTCGCCTGCAGTCCAGCGCCAGCCGCGCGCTCGACGTGGTA
CGCGAGACGGTCCAGGAAACCGCCCTCGACCCGCAGGCCCAGGCCATGCTCGGCGAGGCGCGGCAACTGATC
GGCGAATGCCAGCAGATGCTGGTGCAGCACATCGCCGATCTCGACGAGTTCGCCTGGCAGGGCGGCCAGCGC
GCCCAGGTGCTCTACGACGCGGCGCTGGCCTCGCGGATGCGACCGTTCGCCGACGTCCTTAGCGGCCAGGCG
CGGATGGTTCGCGACCTGGGCCGCTCGCTGGGCAAGCAGGTGCGCCTGCTGGTCGAGGGCGAAAGCACCCAG
GTCGACCGGGATGTCCTGGAAAAACTCGAAGCGCCGCTCACCCACCTGCTGCGCAATGCCGTCGATCACGGT
ATCGAGGCGCCGGAAACCCGCCTCGCCGCCGGCAAGCCGGCCGAGGGCAGGATCACCATCCGCGCCCGCCAC
CACGCCGGCATGCTGGTCCTGGAACTGAGCGACGACGGCGGCGGCATCGATCTGCAGCGCCTGCGCGAGACC
GTGCTCAATCGCCAGTTCGCCACCGCCGAGACCGCGGCGCAATTGAGCGAGGAGGAACTCCTGGCGTTTCTC
TTCCTGCCCGGCTTCAGCATGCGCGAGCAGGTCACCGAGGTGTCCGGTCGCGGCGTCGGACTGGACGCCGTG
CAGCACATGGTCCGCCAGTTGCGTGGCGGCGTGCGCATGGAGCAACGCCAGGGGCAGGGCACGCTGTTCCAC
GTCGAGGTGCCGCTGACCCTGTCCGTGGTGCGCAGCCTGGTGGTGGAGATCGGCGAGGAGGCCTACGCCTTT
CCGCTGGCGCACATCGAGCGCATGTGCGAGCTGGAGGCGGAGGAGATCATCCAGCTCGAAGGGCGCCAGCAC
TTCTGGTACGAGGGTCGCCATGTCGGCCTGGTCTCGGCTGCGCAACTGCTGCAGCGGCCCGAGAGCAGCCGC
ACCGAAGGGGCTATCCCGGTAGTGGTAGTGCGCGACCGCGATGCGGTCTACGGCGTCGCCGTGGAGCGTTTC
GTCGGCGAGCGTACCCTGGTGGTGATGCCTCTCGATCCGCGCCTGGGCAAGGTGCGCGACGTTTCCGCCGGC
GCCTTGCTGGACGACGGTTCGCCGGTGCTGATCCTGGACGTCGAGGACCTCCTGCATTCGGTCGGCAAGTTG
CTCAGCAGCGGCCGCCTGGAGCGCATCGATCGCAGCCGGCGGCAGGCCGGCGGGGCGCAACGCAAGCGCATC
CTGGTGGTCGACGACTCGCTCACGGTGCGTGAGCTGGAACGCAAGCTCCTGCTCGGCCGCGGCTACGACGTG
GCAGTGGCGGTGGATGGCATGGACGGCTGGAACGCCCTGCGCTCGGAGCATTTCGACCTGCTCATCACCGAT
ATCGACATGCCGCGCATGGACGGTATCGAACTGGTCACCCTGGTGCGTCGCGACAGCCGCCTGCAGTCGCTG
CCGGTGATGGTGGTGTCCTACAAGGATCGTGAGGAGGACCGTCGGCGCGGTCTCGACGCCGGCGCCGACTAT
TATCTGGCGAAGGCCAGTTTCCACGATGAGGCCTTGCTGGATGCCGTCGTCGTCCTGATCGGAGAAGCACAG
GGTTGA |
Translation:
MTPDQMRDASLLELFRLEAEAQTQVLNAGLMALERSPTQADQLEACMRAAHSLKGAARIVGLDAGVRVAHVM
EDCLVEAQDGRLLLQSEHIDALLQGCDLLLRIGTPPAGDAGWAEDAGREEIDGLVQRLEGLVRSGLPLARAE
LPATTPGLPEAAPEAPPAASAAASDDNDEEPAGQAGGEQAEERRSRVLRVTAERLDRLLDISSKSLVEFQRI
KPLADSLQRLRRLQSSASRALDVVRETVQETALDPQAQAMLGEARQLIGECQQMLVQHIADLDEFAWQGGQR
AQVLYDAALASRMRPFADVLSGQARMVRDLGRSLGKQVRLLVEGESTQVDRDVLEKLEAPLTHLLRNAVDHG
IEAPETRLAAGKPAEGRITIRARHHAGMLVLELSDDGGGIDLQRLRETVLNRQFATAETAAQLSEEELLAFL
FLPGFSMREQVTEVSGRGVGLDAVQHMVRQLRGGVRMEQRQGQGTLFHVEVPLTLSVVRSLVVEIGEEAYAF
PLAHIERMCELEAEEIIQLEGRQHFWYEGRHVGLVSAAQLLQRPESSRTEGAIPVVVVRDRDAVYGVAVERF
VGERTLVVMPLDPRLGKVRDVSAGALLDDGSPVLILDVEDLLHSVGKLLSSGRLERIDRSRRQAGGAQRKRI
LVVDDSLTVRELERKLLLGRGYDVAVAVDGMDGWNALRSEHFDLLITDIDMPRMDGIELVTLVRRDSRLQSL
PVMVVSYKDREEDRRRGLDAGADYYLAKASFHDEALLDAVVVLIGEAQG* |
AnnotationID:260 | GeneID:250 |
|
Modification Date/Time: |
2006-02-02 14:02:55 |
|
|
|
GeneProduct: | putative chemotaxis sensor/effector fusion protein |
|
|
|
Cell Localization Confidence Code: | 5 |
|
|
Functional Category: | (16) Motility & Attachment |
|
Alternate Gene Product Name: | |
|
Functional Category Confidence Code: | 5 |
|
|
Secondary Functional Category(ies): | Chemotaxis |
|
|
|
|
Homology: | >gb|AAO92337.1| (AY074937) WspE [Pseudomonas fluorescens]
Length = 755
Score = 1040 bits (2688), Expect = 0.0
Identities = 550/769 (71%), Positives = 626/769 (81%), Gaps = 16/769 (2%)
>gb|AAN67114.1|AE016340_5 (AE016779) sensor histidine kinase/response regulator [Pseudomonas
putida KT2440]
Length = 762
Score = 1007 bits (2603), Expect = 0.0
Identities = 531/769 (69%), Positives = 614/769 (79%), Gaps = 7/769 (0%)
>dbj|BAB54725.1| (AP003017) chemotaxis histidine kinase [Mesorhizobium loti]
Length = 757
Score = 725 bits (1871), Expect = 0.0
Identities = 404/781 (51%), Positives = 524/781 (67%), Gaps = 40/781 (5%) |
|
Structural Features: | COG0643, CheA, Chemotaxis protein histidine kinase and related kinases
[Cell motility and secretion / Signal transduction mechanisms]
CD-Length = 716 residues, 99.9% aligned
Score = 480 bits (1238), Expect = 4e-136
Identities = 237/715 (33%), Positives = 329/715 (46%), Gaps = 90/715 (12%) |
|
|
|
|
|